RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 EFCAB7A8K855 629 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 NKX2-8O15522 239 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 DUX1O43812 170 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 PGLSO95336 258 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 TNFAIP3P21580 790 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 PSMA2P25787 234 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 HSPA9P38646 679 aaKnown RBP12.11□□□□□ -0.47
LIMS2-210ENST00000413578 ACTR1BP42025 376 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 CCR10P46092 362 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 ZNF135P52742 658 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-210ENST00000413578 COPB1P53618 953 aaKnown RBP12.11□□□□□ -0.47
LIMS2-210ENST00000413578 ACTR1AP61163 376 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 PEX6Q13608 980 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 PTPRRQ15256 657 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 PYCR3Q53H96 274 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 DCAF12Q5T6F0 453 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 ANKS6Q68DC2 871 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 RAET1GQ6H3X3 334 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 TIPARPQ7Z3E1 657 aaKnown RBP12.11□□□□□ -0.47
LIMS2-210ENST00000413578 TSPAN33Q86UF1 283 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 SFRP1Q8N474 314 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 LZTR1Q8N653 840 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 NEK11Q8NG66 645 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 SLC37A2Q8TED4 501 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 FNIP1Q8TF40 1166 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 PIH1D2Q8WWB5 315 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 OR2M4Q96R27 311 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 ERGIC2Q96RQ1 377 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 SEPT11Q9NVA2 429 aaKnown RBP12.11□□□□□ -0.47
LIMS2-210ENST00000413578 ETNK2Q9NVF9 386 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 SLC39A1Q9NY26 324 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 PCSK1NQ9UHG2 260 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 PHTF1Q9UMS5 762 aa12.11□□□□□ -0.47
LIMS2-210ENST00000413578 NOTCH2Q04721 2471 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 LRRC10BA6NIK2 292 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 LGALS16A8MUM7 142 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 DAPK3O43293 454 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 FZD6O60353 706 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 MAFKO60675 156 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 LRCH4O75427 683 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 EML2O95834 649 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 CYP2A6P11509 494 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-210ENST00000413578 GP1BBP13224 206 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 MIPP30301 263 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 MC2RQ01718 297 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 LRP8Q14114 963 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 CRTC2Q53ET0 693 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-210ENST00000413578 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 DENND2CQ68D51 928 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 WDR74Q6RFH5 385 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-210ENST00000413578 RFLNAQ6ZTI6 216 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
LIMS2-210ENST00000413578 IRF2BP2Q7Z5L9 587 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 NLRP8Q86W28 1048 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 PAF1Q8N7H5 531 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 C9orf43Q8TAL5 461 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-210ENST00000413578 COX14Q96I36 57 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 NUP62CLQ9H1M0 184 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 ABCG8Q9H221 673 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 PARVAQ9NVD7 372 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
LIMS2-210ENST00000413578 LIMA1Q9UHB6 759 aaKnown RBP12.1□□□□□ -0.47
LIMS2-210ENST00000413578 TMEM184BQ9Y519 407 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-210ENST00000413578 PCYT1BQ9Y5K3 369 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-210ENST00000413578 TEX15Q9BXT5 2789 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 A0A0U1RQS6 177 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 A6NCN8 305 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-210ENST00000413578 DLGAP3O95886 979 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 NTRK1P04629 796 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 ATP1A3P13637 1013 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 DESP17661 470 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 MAP4P27816 1152 aaKnown RBP12.09□□□□□ -0.47
LIMS2-210ENST00000413578 IL1R2P27930 398 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 OAS2P29728 719 aaKnown RBP12.09□□□□□ -0.47
LIMS2-210ENST00000413578 ABHD18Q0P651 414 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 CDC20Q12834 499 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 BIRC2Q13490 618 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 ZNF235Q14590 738 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 DPYSL2Q16555 572 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 PPP6R3Q5H9R7 873 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-210ENST00000413578 DOK6Q6PKX4 331 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 ZNF765Q7L2R6 523 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 TRIM74Q86UV6 250 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 ZNF761Q86XN6 746 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-210ENST00000413578 FAM129CQ86XR2 697 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 NLGN4XQ8N0W4 816 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 NLGN4YQ8NFZ3 816 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-210ENST00000413578 PDCD6IPQ8WUM4 868 aaKnown RBP12.09□□□□□ -0.47
LIMS2-210ENST00000413578 SCAMP4Q969E2 229 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 ABHD17AQ96GS6 310 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 SMIM14Q96QK8 99 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 AGAP2Q99490 1192 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 GPN2Q9H9Y4 310 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-210ENST00000413578 APMAPQ9HDC9 416 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 FBXO8Q9NRD0 319 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms