RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 EGLN2Q96KS0 407 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 CEP295NLQ96MC4 621 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 CDRT15Q96T59 188 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 ANKRD2Q9GZV1 360 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 PPP1R3EQ9H7J1 279 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 GRPEL1Q9HAV7 217 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 TMEM51Q9NW97 253 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 OR6C3Q9NZP0 311 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 OR14J1Q9UGF5 321 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 FBXW11Q9UKB1 542 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 EXO1Q9UQ84 846 aaKnown RBP4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 TMEM272A0A1B0GTI8 110 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 A0A1B0GVM2 712 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 A0A1W2PR77 199 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 GAGE12JA6NER3 117 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 E5RJQ4 531 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 LDB2O43679 373 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 DAB1O75553 588 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 RSL1D1O76021 490 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 NDUFB8O95169 186 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZWINTO95229 277 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 KCNK5O95279 499 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 IFNA2P01563 188 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 ICAM1P05362 532 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 TPOP07202 933 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 THPOP40225 353 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 GPR143P51810 404 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 SELENOVP59797 346 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 PPP2R2BQ00005 443 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 CAMK2DQ13557 499 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 SNTB1Q13884 538 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 KRT33BQ14525 404 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 COG2Q14746 738 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZNF805Q5CZA5 627 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 Q5PR19 223 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 WASHC2DQ5SRD0 308 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 RARS2Q5T160 578 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 HECTD3Q5T447 861 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 LRCH2Q5VUJ6 765 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 DCAF12L2Q5VW00 463 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 KRT79Q5XKE5 535 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 GGNBP1Q5YKI7 109 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 METTL2BQ6P1Q9 378 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 SHQ1Q6PI26 577 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 PARM1Q6UWI2 310 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 B3GNT6Q6ZMB0 384 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 SHFQ7M4L6 423 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 DNAJB7Q7Z6W7 309 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 CTU1Q7Z7A3 348 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 TSPAN33Q86UF1 283 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 CEP97Q8IW35 865 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 MMP21Q8N119 569 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 MIGA1Q8NAN2 632 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 METTL2AQ96IZ6 378 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 APOLD1Q96LR9 279 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 SEMA4CQ9C0C4 833 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 PRSS22Q9GZN4 317 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 ISCUQ9H1K1 167 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 ESRP2Q9H6T0 727 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 DNAJC18Q9H819 358 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 ERVMER34-1Q9H9K5 563 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 ACSS1Q9NUB1 689 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 FLRT1Q9NZU1 646 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 SLC9A2Q9UBY0 812 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 AMACRQ9UHK6 382 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 TTC7AQ9ULT0 858 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 PCDHA12Q9UN75 941 aa4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 SRPRBQ9Y5M8 271 aaKnown RBP4.82□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZMYM2Q9UBW7 1377 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZNF644Q9H582 1327 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 GPR75-ASB3A0A0A6YYF3 556 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 TRBC2A0A5B9 178 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 LNP1A1A4G5 178 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 CYR61O00622 381 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 CLGNO14967 610 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 PLRG1O43660 514 aaKnown RBP4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 ITM2AO43736 263 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 GPTP24298 496 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 MMP14P50281 582 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 NHLH1Q02575 133 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 SREBF2Q12772 1141 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 ALCAMQ13740 583 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 IL11RAQ14626 422 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZNF284Q2VY69 593 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZNF628Q5EBL2 1059 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 TRAPPC11Q7Z392 1133 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 ADGRG3Q86Y34 549 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 EPHX4Q8IUS5 362 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 HM13Q8TCT9 377 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 PTPMT1Q8WUK0 201 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 TRIB2Q92519 343 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 INPP5DQ92835 1189 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 ADPGKQ9BRR6 497 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 OPA3Q9H6K4 179 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZWILCHQ9H900 591 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 CLK4Q9HAZ1 481 aaKnown RBP4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 EPB41L5Q9HCM4 733 aa4.81□□□□□ -1.64
HMGB3P31-201ENST00000413333 FZD3Q9NPG1 666 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms