RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 LILRA3Q8N6C8 439 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PIH1D2Q8WWB5 315 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 KIFC1Q9BW19 673 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 MKRN2Q9H000 416 aaKnown RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 SLC24A2Q9UI40 661 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 ABCA7Q8IZY2 2146 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3DA0A087WVF3 549 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3IA0A087WXS9 549 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3EA0A087X179 549 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3KA0A087X1G2 549 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 GOLGA8QA0A0J9YX86 632 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 LOC285095A0A1B0GVY8 99 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 A0A1W2PQ67 120 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 GOLGA8OA6NCC3 632 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3FA6NER0 549 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3LB9A6J9 549 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 GOLGA8NF8WBI6 632 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 POP4O95707 220 aaKnown RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 APODP05090 189 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PCCBP05166 539 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 ABHD2P08910 425 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3HP0C7X1 549 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 BPIP17213 487 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3GQ6DHY5 549 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3CQ6IPX1 549 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 SCIMPQ6UWF3 145 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D1Q86TI0 1168 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 SERPINA9Q86WD7 417 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 C10orf107Q8IVU9 208 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 CPNE9Q8IYJ1 553 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TBC1D3Q8IZP1 549 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 LEMD2Q8NC56 503 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 RPLP0P6Q8NHW5 317 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 P2RY13Q9BPV8 354 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PITPNM3Q9BZ71 974 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 FOXQ1Q9C009 403 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 HAUS2Q9NVX0 235 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 GDE1Q9NZC3 331 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 XPR1Q9UBH6 696 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PRSS21Q9Y6M0 314 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 NDC80O14777 642 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PSMD3O43242 534 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 RPP40O75818 363 aaKnown RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PTPRZ1P23471 2315 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 ARCN1P48444 511 aaKnown RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 IL9RQ01113 521 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 C18orf21Q32NC0 220 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 ZNF542PQ5EBM4 170 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 VWA5B1Q5TIE3 1220 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 HECTD2Q5U5R9 776 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 RAET1GQ6H3X3 334 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PTCRAQ6ISU1 281 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PAQR3Q6TCH7 311 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 LAYNQ6UX15 382 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 TPRG1Q6ZUI0 275 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 HDDC3Q8N4P3 179 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 LRRC39Q96DD0 335 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 CEP295NLQ96MC4 621 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 NRTNQ99748 197 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 S1PR5Q9H228 398 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 IL26Q9NPH9 171 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PSMD13Q9UNM6 376 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 STON1Q9Y6Q2 735 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 WASF2Q9Y6W5 498 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 CACNA1IQ9P0X4 2223 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 TCF20Q9UGU0 1960 aaKnown RBP9.68□□□□□ -0.86
SMPD4-203ENST00000412570 A0A0J9YYE9 177 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 CACNG3O60359 315 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 SIX3O95343 332 aaPredicted RBP9.68□□□□□ -0.86
SMPD4-203ENST00000412570 TRBC1P01850 177 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 CNTN1Q12860 1018 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 KCNC3Q14003 757 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 MRNIPQ6NTE8 343 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 PLCD4Q9BRC7 762 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 HACD3Q9P035 362 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 OR1A2Q9Y585 309 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 CHD5Q8TDI0 1954 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 GLYATL1P3A0A0U1RQE8 302 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 GMNCA6NCL1 334 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 ZBTB14O43829 449 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 SKAP2O75563 359 aaPredicted RBP9.68□□□□□ -0.86
SMPD4-203ENST00000412570 MAGEA6P43360 314 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 SERPINB4P48594 390 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 NAGLUP54802 743 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 SLC44A4Q53GD3 710 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 TAF1BQ53T94 588 aaPredicted RBP9.68□□□□□ -0.86
SMPD4-203ENST00000412570 INO80DQ53TQ3 878 aaPredicted RBP9.68□□□□□ -0.86
SMPD4-203ENST00000412570 HABP4Q5JVS0 413 aaKnown RBP9.68□□□□□ -0.86
SMPD4-203ENST00000412570 SEL1L3Q68CR1 1132 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 MBOAT1Q6ZNC8 495 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 USP45Q70EL2 814 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 CILP2Q8IUL8 1156 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 ZNF398Q8TD17 642 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 MARK4Q96L34 752 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 MRGPRX3Q96LB0 322 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 TRIB3Q96RU7 358 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 CPNE1Q99829 537 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 STOML2Q9UJZ1 356 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 MIA3Q5JRA6 1907 aa9.68□□□□□ -0.86
SMPD4-203ENST00000412570 SMAPO00193 183 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms