RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 C9orf131Q5VYM1 1079 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 SPESP1Q6UW49 350 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 RXFP2Q8WXD0 754 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 SUSD6Q92537 303 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 SLC38A4Q969I6 547 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 PPCDCQ96CD2 204 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 EXOC2Q96KP1 924 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 SYT15Q9BQS2 421 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 TMPRSS11EQ9UL52 423 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 A0A0J9YVX5 310 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 MSH4O15457 936 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 SLC28A2O43868 658 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 GLI1P08151 1106 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 VARSP26640 1264 aaKnown RBP7.38□□□□□ -1.23
PTPN3-203ENST00000412145 CASP1P29466 404 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 GMPSP49915 693 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-203ENST00000412145 RORCP51449 518 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 OVOS1Q6IE37 1185 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 CERS6Q6ZMG9 384 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 RBM44Q6ZP01 1051 aaKnown RBP7.38□□□□□ -1.23
PTPN3-203ENST00000412145 IQCF2Q8IXL9 164 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 POF1BQ8WVV4 589 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 CXorf40BQ96DE9 158 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 ZNF668Q96K58 619 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-203ENST00000412145 C7orf50Q9BRJ6 194 aaKnown RBP7.38□□□□□ -1.23
PTPN3-203ENST00000412145 ACSS3Q9H6R3 686 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 MARCH7Q9H992 704 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 XPNPEP3Q9NQH7 507 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 INTS10Q9NVR2 710 aaKnown RBP7.38□□□□□ -1.23
PTPN3-203ENST00000412145 FOXN3O00409 490 aaPredicted RBP7.38□□□□□ -1.23
PTPN3-203ENST00000412145 RFXANKO14593 260 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 AMHP03971 560 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 DNTTP04053 509 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 FABP3P05413 133 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 TAS2R43P59537 309 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 PPP2R2BQ00005 443 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 FOLH1Q04609 750 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 PQLC1Q8N2U9 271 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 TTLQ8NG68 377 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 OR8H1Q8NGG4 311 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 IGDCC4Q8TDY8 1250 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 DENND1AQ8TEH3 1009 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 CERS2Q96G23 380 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 C16orf58Q96GQ5 468 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 AIF1LQ9BQI0 150 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 ISCA1Q9BUE6 129 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 EXO5Q9H790 373 aa7.38□□□□□ -1.23
PTPN3-203ENST00000412145 AZIN1O14977 448 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 ATG12O94817 140 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 YES1P07947 543 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 ATP5A1P25705 553 aaKnown RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 S100A7P31151 101 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 SYT16Q17RD7 645 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 SLC5A9Q2M3M2 681 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 NT5DC1Q5TFE4 455 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 KBTBD2Q8IY47 623 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 OR2T12Q8NG77 320 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 TBC1D16Q8TBP0 767 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 TBATAQ96M53 351 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 YME1L1Q96TA2 773 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 NPAS2Q99743 824 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 NUSAP1Q9BXS6 441 aaKnown RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 FARSBQ9NSD9 589 aaKnown RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 DNAJC11Q9NVH1 559 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 NKIRAS2Q9NYR9 191 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 COG5Q9UP83 839 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 RPL36Q9Y3U8 105 aaKnown RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 GAKO14976 1311 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 TULP4Q9NRJ4 1543 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 NCANO14594 1321 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 SLC33A1O00400 549 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 ANXA3P12429 323 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 RORAP35398 523 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 MAGEA12P43365 314 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 PTPN21Q16825 1174 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 C10orf62Q5T681 223 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 RNASEH2BQ5TBB1 312 aaKnown RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 CAPN13Q6MZZ7 669 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 OR4C15Q8NGM1 316 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 UBA3Q8TBC4 463 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 TOP1MTQ969P6 601 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 ARL8BQ9NVJ2 186 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 CACNB4O00305 520 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 VNN2O95498 520 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 CTSEP14091 401 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 BUD31P41223 144 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 ACVR2BQ13705 512 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 SLC27A1Q6PCB7 646 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 C3P1Q6ZMU1 363 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 THAP6Q8TBB0 222 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 POC1BQ8TC44 478 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 ZKSCAN4Q969J2 545 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 CENPNQ96H22 339 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 SMAD5Q99717 465 aaKnown RBP7.37□□□□□ -1.23
PTPN3-203ENST00000412145 TAS2R1Q9NYW7 299 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 WASF2Q9Y6W5 498 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 H7C2Y5 167 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 MSCO60682 206 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 SEC23BQ15437 767 aa7.37□□□□□ -1.23
PTPN3-203ENST00000412145 GNASQ5JWF2 1037 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms