RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ADAP00813 363 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 HEXAP06865 529 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 HEXBP07686 556 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 ZFYP08048 801 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 RFPL3SP0C7P2 107 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 MMP9P14780 707 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 TYMPP19971 482 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 EDN2P20800 178 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 TCEA1P23193 301 aaKnown RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 HOXA11P31270 313 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 CDAP32320 146 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 SKIV2L2P42285 1042 aaKnown RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 MATR3P43243 847 aaKnown RBP eCLIP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 CLCN3P51790 818 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 LUMP51884 338 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 OAZ1P54368 228 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 ADPRHP54922 357 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 HTD2P86397 168 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 ACSM2AQ08AH3 577 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 HFEQ30201 348 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 CXorf66Q5JRM2 361 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 ACSM2BQ68CK6 577 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 KDELC1Q6UW63 502 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 OLFML1Q6UWY5 402 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 PPP1R21Q6ZMI0 780 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 ARHGEF25Q86VW2 580 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 CNTN4Q8IWV2 1026 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 UEVLDQ8IX04 471 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 KLHL7Q8IXQ5 586 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 GUF1Q8N442 669 aaKnown RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 RTL3Q8N8U3 475 aaKnown RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 HJURPQ8NCD3 748 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF606Q8WXB4 792 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 SGCDQ92629 289 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 SYAP1Q96A49 352 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 P2RY11Q96G91 374 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 NEK1Q96PY6 1258 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 CDRT15Q96T59 188 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 UTP14AQ9BVJ6 771 aaKnown RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 CADM1Q9BY67 442 aaKnown RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 GPR88Q9GZN0 384 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 DENND2DQ9H6A0 471 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 TASP1Q9H6P5 420 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 OLAHQ9NV23 265 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 TAS2R3Q9NYW6 316 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 CGNQ9P2M7 1197 aaKnown RBP4.58□□□□□ -1.68
BRCA1-204ENST00000412061 IL19Q9UHD0 177 aa4.58□□□□□ -1.68
BRCA1-204ENST00000412061 EMSYQ7Z589 1322 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF644Q9H582 1327 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SYNJ2BP-COX16A0A087WUM0 186 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 FAM237AA0A1B0GTK4 181 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SMIM30A4D0T7 59 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 OR6C68A6NDL8 312 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 ANXA2P2A6NMY6 339 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 MCIDASD6RGH6 385 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SMIM22K7EJ46 135 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 HCRTR2O43614 444 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 PLRG1O43660 514 aaKnown RBP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SIX3O95343 332 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SLC2A4P14672 509 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 CTPS1P17812 591 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 TACR3P29371 465 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 TYK2P29597 1187 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 GDF5P43026 501 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 GABRB2P47870 512 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 BLKP51451 505 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 INHBCP55103 352 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SLC26A5P58743 744 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 ARF5P84085 180 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 PPIGQ13427 754 aaKnown RBP eCLIP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 KCNC3Q14003 757 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 FHL2Q14192 279 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SNAPC1Q16533 368 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 AWAT1Q58HT5 328 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 DAB2IPQ5VWQ8 1189 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 DHRS13Q6UX07 377 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 TDRPQ86YL5 185 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 RFX6Q8HWS3 928 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 CCDC13Q8IYE1 715 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SFRP1Q8N474 314 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 HDDC3Q8N4P3 179 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SCAIQ8N9R8 606 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 NHLRC2Q8NBF2 726 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 NEK11Q8NG66 645 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SPATA18Q8TC71 538 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 GDPD5Q8WTR4 605 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 LPGAT1Q92604 370 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 TRIM44Q96DX7 344 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 ERO1AQ96HE7 468 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 VPS39Q96JC1 886 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 RITA1Q96K30 269 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF558Q96NG5 402 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 NUF2Q9BZD4 464 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 ABCG8Q9H221 673 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 ENTPD7Q9NQZ7 604 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 SEMA4GQ9NTN9 838 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 CNIH4Q9P003 139 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 NLKQ9UBE8 527 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 ARPP21Q9UBL0 812 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms