RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 FAF2Q96CS3 445 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 AP2M1Q96CW1 435 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 CMKLR1Q99788 373 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 TDRD1Q9BXT4 1180 aaKnown RBP14.7□□□□□ -0.06
CBX3-203ENST00000409747 DEF6Q9H4E7 631 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 RBM22Q9NW64 420 aaKnown RBP eCLIP14.7□□□□□ -0.061e-7■■■□□ 18
CBX3-203ENST00000409747 ZNHIT6Q9NWK9 470 aaKnown RBP14.7□□□□□ -0.06
CBX3-203ENST00000409747 AKAP7Q9P0M2 348 aaPredicted RBP14.7□□□□□ -0.06
CBX3-203ENST00000409747 TAAR2Q9P1P5 351 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 ACSL6Q9UKU0 697 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 RPL26L1Q9UNX3 145 aaKnown RBP14.7□□□□□ -0.06
CBX3-203ENST00000409747 LOXL2Q9Y4K0 774 aa14.7□□□□□ -0.06
CBX3-203ENST00000409747 CBFA2T2O43439 604 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 PDHA1P08559 390 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 SLC5A2P31639 672 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 CLN3Q13286 438 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 CCDC81Q6ZN84 652 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 ZNF438Q7Z4V0 828 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 C17orf82Q86X59 251 aaPredicted RBP14.69□□□□□ -0.06
CBX3-203ENST00000409747 NRROSQ86YC3 692 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 NRSN1Q8IZ57 195 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 HDAC11Q96DB2 347 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 XPO4Q9C0E2 1151 aaKnown RBP14.69□□□□□ -0.06
CBX3-203ENST00000409747 SPATS2LQ9NUQ6 558 aaKnown RBP14.69□□□□□ -0.06
CBX3-203ENST00000409747 PISDQ9UG56 409 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 ATXN7L1Q9ULK2 861 aaPredicted RBP14.69□□□□□ -0.06
CBX3-203ENST00000409747 GCN1Q92616 2671 aaKnown RBP14.69□□□□□ -0.06
CBX3-203ENST00000409747 K7ENP7 123 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 NVLO15381 856 aaKnown RBP14.69□□□□□ -0.06
CBX3-203ENST00000409747 CPNE6O95741 557 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 PRB1P04280 392 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 FGF1P05230 155 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 TPM1P09493 284 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 GPR3P46089 330 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 DSC2Q02487 901 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 LRP8Q14114 963 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 NR1D2Q14995 579 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 INO80CQ6PI98 192 aaPredicted RBP14.69□□□□□ -0.06
CBX3-203ENST00000409747 SLC30A9Q6PML9 568 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 PIM3Q86V86 326 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 SCARF2Q96GP6 870 aaPredicted RBP14.69□□□□□ -0.06
CBX3-203ENST00000409747 OR2M4Q96R27 311 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 ANP32EQ9BTT0 268 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 ABCG8Q9H221 673 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 CD84Q9UIB8 345 aa14.69□□□□□ -0.06
CBX3-203ENST00000409747 SSU72P8A0A1W2PR75 194 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 MAP3K6O95382 1288 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 ECEL1O95672 775 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 ADCY8P40145 1251 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 STC1P52823 247 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 MAZP56270 477 aaKnown RBP14.68□□□□□ -0.06
CBX3-203ENST00000409747 B4GALNT1Q00973 533 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 CTBSQ01459 385 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 PTSQ03393 145 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 ZSCAN23Q3MJ62 389 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 ATP13A4Q4VNC1 1196 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 PHF19Q5T6S3 580 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 DOK6Q6PKX4 331 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 SLITRK4Q8IW52 837 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 SFTPA2Q8IWL1 248 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 CCDC13Q8IYE1 715 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 CCNYQ8ND76 341 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 OR8K1Q8NGG5 319 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 EXD1Q8NHP7 514 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 CCNL2Q96S94 520 aaPredicted RBP14.68□□□□□ -0.06
CBX3-203ENST00000409747 PCDH9Q9HC56 1237 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 SEPT10Q9P0V9 454 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 CHKBQ9Y259 395 aa14.68□□□□□ -0.06
CBX3-203ENST00000409747 SCN8AQ9UQD0 1980 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 ZNF487B1APH4 448 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 C1QL1O75973 258 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 SOD1P00441 154 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 FUCA1P04066 466 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 HLA-DQB2P05538 268 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 TMEM253P0C7T8 217 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 LIPCP11150 499 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 HGFP14210 728 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 AK4P27144 223 aaPredicted RBP14.67□□□□□ -0.06
CBX3-203ENST00000409747 ALDH4A1P30038 563 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 ACTR1BP42025 376 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 POLD2P49005 469 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 TAS2R40P59535 323 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 ACTR1AP61163 376 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 CFHR1Q03591 330 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 GBE1Q04446 702 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 PTPRRQ15256 657 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 VSIG1Q86XK7 387 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 GALNT13Q8IUC8 556 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.67□□□□□ -0.06
CBX3-203ENST00000409747 LYSMD1Q96S90 227 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 DNAJC7Q99615 494 aa14.67□□□□□ -0.06
CBX3-203ENST00000409747 ARHGEF17Q96PE2 2063 aaPredicted RBP14.67□□□□□ -0.06
CBX3-203ENST00000409747 AKR1B10O60218 316 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 CD82P27701 267 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 AMZ1Q400G9 498 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 TMEM164Q5U3C3 297 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 PCSK4Q6UW60 755 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 PQLC3Q8N755 202 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 LPCAT1Q8NF37 534 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 ARRDC2Q8TBH0 407 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms