RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
RNF43-201ENST00000407977 CNSTQ6PJW8 725 aa12.95□□□□□ -0.34
RNF43-201ENST00000407977 HDAC10Q969S8 669 aa12.95□□□□□ -0.34
RNF43-201ENST00000407977 PPCDCQ96CD2 204 aa12.95□□□□□ -0.34
RNF43-201ENST00000407977 NXNL1Q96CM4 212 aa12.95□□□□□ -0.34
RNF43-201ENST00000407977 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
RNF43-201ENST00000407977 TMEM165Q9HC07 324 aa12.95□□□□□ -0.34
RNF43-201ENST00000407977 UGT2B17O75795 530 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 HNF4AP41235 474 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 SEPHS1P49903 392 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 WNT3AP56704 352 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 INTS6LQ5JSJ4 861 aaKnown RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 SULT1C3Q6IMI6 304 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 UNC5BQ8IZJ1 945 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 CPT1BQ92523 772 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 CLP1Q92989 425 aaKnown RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 TP53INP1Q96A56 240 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 LENG8Q96PV6 779 aaPredicted RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 GPATCH1Q9BRR8 931 aaKnown RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 PCDHGC3Q9UN70 934 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 TRIM17Q9Y577 477 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 PCDHB1Q9Y5F3 818 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 CXCL11O14625 94 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 ADAMDEC1O15204 470 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 TCEA3O75764 348 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 FABP3P05413 133 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 TSPAN8P19075 237 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 HTR7P34969 479 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 MNDAP41218 407 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 KIR3DL1P43629 444 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 LIPEQ05469 1076 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 FAM171A1Q5VUB5 890 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 SLC26A9Q7LBE3 791 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 C11orf24Q96F05 449 aaPredicted RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 ACO2Q99798 780 aaKnown RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 ABHD16BQ9H3Z7 469 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 LRRC14BA6NHZ5 514 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 CHURC1-FNTBB4DL54 471 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 E7ENX8 843 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 NOS1APO75052 506 aaPredicted RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 MAFO75444 373 aaPredicted RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 POLR2EP19388 210 aaKnown RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 CCR4P51679 360 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 PTPN5P54829 565 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 MRPS5P82675 430 aaKnown RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 CPSF6Q16630 551 aaKnown RBP eCLIP12.94□□□□□ -0.34
RNF43-201ENST00000407977 SLC25A52Q3SY17 297 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 SLC39A12Q504Y0 691 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 CPTPQ5TA50 214 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 ALG2Q9H553 416 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 GLOD4Q9HC38 313 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 PLIN3O60664 434 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 RIPPLY1Q0D2K3 151 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 RNASEH2BQ5TBB1 312 aaKnown RBP12.94□□□□□ -0.34
RNF43-201ENST00000407977 SCIMPQ6UWF3 145 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 PACRGLQ8N7B6 248 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 SLC4A11Q8NBS3 891 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 ARRDC4Q8NCT1 418 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 WDR37Q9Y2I8 494 aa12.94□□□□□ -0.34
RNF43-201ENST00000407977 FADS2P1A8MWK0 482 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 MEIS2O14770 477 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SH3BGRLO75368 114 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 ACADLP28330 430 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 CDH5P33151 784 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 CDH13P55290 713 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SUZ12Q15022 739 aaKnown RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 TCEAL5Q5H9L2 206 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 RBM20Q5T481 1227 aaKnown RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 REP15Q6BDI9 236 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SATL1Q86VE3 508 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 OR8H1Q8NGG4 311 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 DNAJB8Q8NHS0 232 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 TAMM41Q96BW9 452 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 EXD2Q9NVH0 621 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 HMGXB4Q9UGU5 601 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 POMPQ9Y244 141 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 TRPV2Q9Y5S1 764 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 DCDC2CA8MYV0 355 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 RNF225M0QZC1 329 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 PAPSS1O43252 624 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 NDUFS2O75306 463 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 KCNA10Q16322 511 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 CA9Q16790 459 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 TEX44Q53QW1 395 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 MCCC1Q96RQ3 725 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 DNMT3LQ9UJW3 386 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 DGKBQ9Y6T7 804 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 NPHS1O60500 1241 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 FGBP02675 491 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 C9P02748 559 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 PGRP06401 933 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 RALGDSQ12967 914 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SWI5Q1ZZU3 235 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 RASAL3Q86YV0 1011 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 UBR7Q8N806 425 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SCAIQ8N9R8 606 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 IPCEF1Q8WWN9 437 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 CAB39LQ9H9S4 337 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms