RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TTC30BQ8N4P2 665 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 DEFB119Q8N690 84 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 OR13C4Q8NGS5 318 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 AENQ8WTP8 325 aaKnown RBP8.35□□□□□ -1.07
GPC3-203ENST00000406757 PYROXD1Q8WU10 500 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 RLN3Q8WXF3 142 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 PIGKQ92643 395 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 ZNF669Q96BR6 464 aaPredicted RBP8.35□□□□□ -1.07
GPC3-203ENST00000406757 MFSD3Q96ES6 412 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 STAMBPL1Q96FJ0 436 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 LRIG1Q96JA1 1093 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 EBNA1BP2Q99848 306 aaKnown RBP8.35□□□□□ -1.07
GPC3-203ENST00000406757 GPR63Q9BZJ6 419 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 CDC42EP4Q9H3Q1 356 aaKnown RBP8.35□□□□□ -1.07
GPC3-203ENST00000406757 SUDS3Q9H7L9 328 aaPredicted RBP8.35□□□□□ -1.07
GPC3-203ENST00000406757 PLAC1Q9HBJ0 212 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 ARNT2Q9HBZ2 717 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 POLMQ9NP87 494 aaPredicted RBP8.35□□□□□ -1.07
GPC3-203ENST00000406757 NINJ2Q9NZG7 142 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.35□□□□□ -1.075e-7■■■■■ 39.3
GPC3-203ENST00000406757 DKK3Q9UBP4 350 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 ZC3H7BQ9UGR2 993 aaKnown RBP8.35□□□□□ -1.07
GPC3-203ENST00000406757 CD84Q9UIB8 345 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 ZMIZ1Q9ULJ6 1067 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 TCAF1Q9Y4C2 921 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 TEX264Q9Y6I9 313 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 CKAP5Q14008 2032 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 ZZEF1O43149 2961 aa8.35□□□□□ -1.07
GPC3-203ENST00000406757 ATXN2Q99700 1313 aaKnown RBP8.34□□□□□ -1.07
GPC3-203ENST00000406757 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 OR51F1A6NGY5 319 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 CAPN8A6NHC0 703 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 E7ESA3 106 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 NEMP1O14524 444 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 NDC80O14777 642 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 LDB2O43679 373 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 ALDH1A2O94788 518 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 PCDH8O95206 1070 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 ACSL3O95573 720 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 ADH1BP00325 375 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 C1SP09871 688 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 PRSS56P0CW18 603 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 ACADMP11310 421 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 CEACAM1P13688 526 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 C5AR1P21730 350 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 ADRA1DP25100 572 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 MCM3P25205 808 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 VIPR1P32241 457 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 PTGER3P43115 390 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 LIG3P49916 1009 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 ARSDP51689 593 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 NEK3P51956 506 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 PMS2P54278 862 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 POLR2LP62875 67 aaKnown RBP8.34□□□□□ -1.07
GPC3-203ENST00000406757 PTSQ03393 145 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 RALGDSQ12967 914 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 CNGA3Q16281 694 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 HSF5Q4G112 596 aaPredicted RBP8.34□□□□□ -1.07
GPC3-203ENST00000406757 ANKRD20A4Q4UJ75 823 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 TSTD2Q5T7W7 516 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 AGBL4Q5VU57 503 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 ALS2CLQ60I27 953 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 FBXO38Q6PIJ6 1188 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 BRAT1Q6PJG6 821 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 UNC5AQ6ZN44 842 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 USP45Q70EL2 814 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 LPCAT2Q7L5N7 544 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 HSD11B1LQ7Z5J1 315 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 TMC3Q7Z5M5 1100 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 TMEFF1Q8IYR6 380 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 NDUFAF2Q8N183 169 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 DEFB124Q8NES8 71 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 PPHLN1Q8NEY8 458 aaKnown RBP8.34□□□□□ -1.07
GPC3-203ENST00000406757 OR4K2Q8NGD2 314 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 OR14C36Q8NHC7 312 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 BRSK1Q8TDC3 778 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 UBLCP1Q8WVY7 318 aaPredicted RBP8.34□□□□□ -1.07
GPC3-203ENST00000406757 MRRFQ96E11 262 aaKnown RBP8.34□□□□□ -1.07
GPC3-203ENST00000406757 SCRN2Q96FV2 425 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 PPP1R16AQ96I34 528 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 DNAJC1Q96KC8 554 aaKnown RBP8.34□□□□□ -1.07
GPC3-203ENST00000406757 HDAC8Q9BY41 377 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 TXLNGYQ9BZA5 131 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 FAM96AQ9H5X1 160 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 VPS37BQ9H9H4 285 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 MAGEE1Q9HCI5 957 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 LRRC4CQ9HCJ2 640 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 TMEM74BQ9NUR3 256 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 SAMD15Q9P1V8 674 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 SLC17A6Q9P2U8 582 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 SOX13Q9UN79 622 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 CYP8B1Q9UNU6 501 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 WASF3Q9UPY6 502 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 PPIL1Q9Y3C6 166 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 FADS3Q9Y5Q0 445 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 RPS6KL1Q9Y6S9 549 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 SPAG17Q6Q759 2223 aa8.34□□□□□ -1.07
GPC3-203ENST00000406757 TBC1D3DA0A087WVF3 549 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBC1D3IA0A087WXS9 549 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBC1D3EA0A087X179 549 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms