RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 C19orf43Q9BQ61 176 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 RIOK2Q9BVS4 552 aaKnown RBP29.25■■■□□ 2.27
USP42-202ENST00000404008 IL22Q9GZX6 179 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 CDH19Q9H159 772 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 FAM83DQ9H4H8 585 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 BFARQ9NZS9 450 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 ANAPC5Q9UJX4 755 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 GPR179Q6PRD1 2367 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 HEATR9A2RTY3 570 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 A6NNZ2 444 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 NDC80O14777 642 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 STX7O15400 261 aaKnown RBP29.24■■■□□ 2.27
USP42-202ENST00000404008 WNT1P04628 370 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 ADRA1DP25100 572 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 MGAT1P26572 445 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 INPP5AQ14642 412 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 DUOXA1Q1HG43 343 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 GLE1Q53GS7 698 aaKnown RBP29.24■■■□□ 2.27
USP42-202ENST00000404008 PNCKQ6P2M8 343 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 LAYNQ6UX15 382 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 IQCHQ86VS3 1027 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 LRRN4CLQ8ND94 238 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 OR4K2Q8NGD2 314 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 PLEKHG4BQ96PX9 1271 aa29.24■■■□□ 2.27
USP42-202ENST00000404008 TSHRP16473 764 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 CRADDP78560 199 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 LAMB3Q13751 1172 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 CCDC6Q16204 474 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 ZDHHC20Q5W0Z9 365 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 PPHLN1Q8NEY8 458 aaKnown RBP29.23■■■□□ 2.27
USP42-202ENST00000404008 OR13C4Q8NGS5 318 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 SYBUQ9NX95 663 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 GRHL1Q9NZI5 618 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 NCDNQ9UBB6 729 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 TCAF1Q9Y4C2 921 aa29.23■■■□□ 2.27
USP42-202ENST00000404008 PCDH15Q96QU1 1955 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 PATE3B3GLJ2 98 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 VILLO15195 856 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 SOD1P00441 154 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 CSNK1EP49674 416 aaKnown RBP29.22■■■□□ 2.27
USP42-202ENST00000404008 PFN3P60673 137 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 OVGP1Q12889 678 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 CALCOCO2Q13137 446 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 TEAD4Q15561 434 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 PCID2Q5JVF3 399 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 ALS2CLQ60I27 953 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 SLC23A3Q6PIS1 610 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 OR13H1Q8NG92 308 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 SEC14L1Q92503 715 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 AGAP2Q99490 1192 aa29.22■■■□□ 2.27
USP42-202ENST00000404008 FRMD8Q9BZ67 464 aaPredicted RBP29.22■■■□□ 2.27
USP42-202ENST00000404008 NLE1Q9NVX2 485 aaPredicted RBP29.22■■■□□ 2.27
USP42-202ENST00000404008 TEAD1P28347 426 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 TRIM23P36406 574 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 SPAM1P38567 509 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 RABIFP47224 123 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 DRG2P55039 364 aaKnown RBP29.21■■■□□ 2.27
USP42-202ENST00000404008 RAET1GQ6H3X3 334 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 Q6ZSR6 202 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 PTAR1Q7Z6K3 402 aaPredicted RBP29.21■■■□□ 2.27
USP42-202ENST00000404008 STYXQ8WUJ0 223 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 KLHDC7BQ96G42 594 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 DNAJC1Q96KC8 554 aaKnown RBP29.21■■■□□ 2.27
USP42-202ENST00000404008 HINFPQ9BQA5 517 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 CAPN10Q9HC96 672 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 IL26Q9NPH9 171 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 GPR27Q9NS67 375 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 CACNA1EQ15878 2313 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 OTOGLQ3ZCN5 2332 aa29.21■■■□□ 2.27
USP42-202ENST00000404008 ADAMTS9Q9P2N4 1935 aa29.2■■■□□ 2.27
USP42-202ENST00000404008 BHMG1C9JSJ3 638 aaPredicted RBP29.2■■■□□ 2.26
USP42-202ENST00000404008 TOR1BO14657 336 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 CFIP05156 583 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 PYGLP06737 847 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 THEGLP0DJG4 465 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 PSMA3P25788 255 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 HADHAP40939 763 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 GPR1P46091 355 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 YPEL5P62699 121 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 TRIM61Q5EBN2 209 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 ARMC3Q5W041 872 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 NLRP9Q7RTR0 991 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 MPP5Q8N3R9 675 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 PTCD2Q8WV60 388 aaKnown RBP29.2■■■□□ 2.26
USP42-202ENST00000404008 ZSCAN5AQ9BUG6 496 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 SPATA16Q9BXB7 569 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 SMOC1Q9H4F8 434 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 CHRAC1Q9NRG0 131 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 DMGDHQ9UI17 866 aaKnown RBP29.2■■■□□ 2.26
USP42-202ENST00000404008 RIMKLBQ9ULI2 386 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 FNDC3AQ9Y2H6 1198 aaKnown RBP29.2■■■□□ 2.26
USP42-202ENST00000404008 OR1A2Q9Y585 309 aa29.2■■■□□ 2.26
USP42-202ENST00000404008 PLXNB3Q9ULL4 1909 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 SDR42E2A6NKP2 422 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 TLR4O00206 839 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 TMPRSS15P98073 1019 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 GUCY2DQ02846 1103 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 TRADDQ15628 312 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 FNBP1LQ5T0N5 605 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 TSTD2Q5T7W7 516 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms