RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 C21orf140B9A014 251 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 KDELR3O43731 214 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 BUB1BO60566 1050 aaPredicted RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 KIAA0754O94854 1291 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 NDUFA10O95299 355 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 VSIG8P0DPA2 414 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 ERCC5P28715 1186 aaPredicted RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 GNA15P30679 374 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 ADCY8P40145 1251 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 ACTR1BP42025 376 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 MAPKAPK2P49137 400 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 SULT1E1P49888 294 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 NDST2P52849 883 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 ITGA1P56199 1179 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 ACTR1AP61163 376 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 CHAF1BQ13112 559 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 IL11RAQ14626 422 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 GRM3Q14832 879 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 SLC25A52Q3SY17 297 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 C8orf34Q49A92 452 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 INO80DQ53TQ3 878 aaPredicted RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 LIPIQ6XZB0 460 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 XYLT1Q86Y38 959 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 IQCKQ8N0W5 287 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 CISD2Q8N5K1 135 aaKnown RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 RBMXL3Q8N7X1 1067 aaKnown RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 RNF31Q96EP0 1072 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 INTS4Q96HW7 963 aaKnown RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 LURAP1Q96LR2 239 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 ZNF641Q96N77 438 aaPredicted RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 RANBP9Q96S59 729 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 GTPBP4Q9BZE4 634 aaKnown RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 ACTL8Q9H568 366 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 ACP6Q9NPH0 428 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 PHPT1Q9NRX4 125 aaPredicted RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 NDFIP2Q9NV92 336 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 SIDT1Q9NXL6 827 aaKnown RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 KLHL3Q9UH77 587 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 DNAI1Q9UI46 699 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 SUFUQ9UMX1 484 aa9.23□□□□□ -0.93
NUP43-204ENST00000403890 G3BP2Q9UN86 482 aaKnown RBP9.23□□□□□ -0.93
NUP43-204ENST00000403890 TACC2O95359 2948 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 ARGFXA6NJG6 315 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 PRSS44E7EML9 344 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 RAMP2O60895 175 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 CEACAM4O75871 244 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 MAP3K6O95382 1288 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 MT-ND3P03897 115 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 ERBB2P04626 1255 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 ELFN1P0C7U0 828 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 RHOQP17081 205 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 ITGA3P26006 1051 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 WDR4P57081 412 aaKnown RBP9.22□□□□□ -0.93
NUP43-204ENST00000403890 ZRSR2Q15696 482 aaKnown RBP9.22□□□□□ -0.93
NUP43-204ENST00000403890 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.22□□□□□ -0.93
NUP43-204ENST00000403890 RWDD4Q6NW29 188 aaKnown RBP9.22□□□□□ -0.93
NUP43-204ENST00000403890 GDF7Q7Z4P5 450 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 RASGRP3Q8IV61 690 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 PELI3Q8N2H9 469 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 SFRP1Q8N474 314 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 NETO2Q8NC67 525 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 SLC37A2Q8TED4 501 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 CT55Q8WUE5 264 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 TBCBQ99426 244 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 TSG101Q99816 390 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 TEX101Q9BY14 249 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 GPR87Q9BY21 358 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 FRMD8Q9BZ67 464 aaPredicted RBP9.22□□□□□ -0.93
NUP43-204ENST00000403890 SYNCQ9H7C4 482 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 LNPEPQ9UIQ6 1025 aa9.22□□□□□ -0.93
NUP43-204ENST00000403890 ANKRD36A6QL64 1941 aa9.21□□□□□ -0.93
NUP43-204ENST00000403890 CROCCQ5TZA2 2017 aa9.21□□□□□ -0.93
NUP43-204ENST00000403890 A0A1B0GVL5 298 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 P4HA2O15460 535 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 LRRTM2O43300 516 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 DIAPH2O60879 1101 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 IVLP07476 585 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 ANKRD34CP0C6C1 535 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 PFKFB1P16118 471 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 GM2AP17900 193 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 PTPN4P29074 926 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 MAPK9P45984 424 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 HHEXQ03014 270 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 CDK18Q07002 472 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 RALGDSQ12967 914 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 NFATC2Q13469 925 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 ACOX1Q15067 660 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 PLEKHN1Q494U1 663 aaPredicted RBP9.21□□□□□ -0.94
NUP43-204ENST00000403890 AFMIDQ63HM1 303 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 SPNS3Q6ZMD2 512 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 NLRP14Q86W24 1093 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 ZNF354CQ86Y25 554 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 DNAAF5Q86Y56 855 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 ZDHHC17Q8IUH5 632 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 PLXDC1Q8IUK5 500 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 PASD1Q8IV76 773 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 SMYD4Q8IYR2 804 aaPredicted RBP9.21□□□□□ -0.94
NUP43-204ENST00000403890 C1orf131Q8NDD1 294 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms