RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TTC9BQ8N6N2 239 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 ISOC1Q96CN7 298 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 SEMA3CQ99985 751 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 POLR1BQ9H9Y6 1135 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 POLR3BQ9NW08 1133 aaPredicted RBP11.96□□□□□ -0.5
RBM39-206ENST00000403542 GALPQ9UBC7 116 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 POLG2Q9UHN1 485 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 DOLKQ9UPQ8 538 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 CCDC162PA2VCL2 907 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 FXYD1O00168 92 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 CDC7O00311 574 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 CLASP2O75122 1294 aaKnown RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 ATE1O95260 518 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 SLC2A3P11169 496 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 IL10P22301 178 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 SLC6A2P23975 617 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 CD52P31358 61 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 CDK9P50750 372 aaKnown RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 CLCN2P51788 898 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 UFM1P61960 85 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 HERVK_113P63132 956 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 ADAM17P78536 824 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 YWHAHQ04917 246 aaPredicted RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 MERTKQ12866 999 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 GRB14Q14449 540 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 PYCR3Q53H96 274 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 UGT3A1Q6NUS8 523 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 SPATA2LQ8IUW3 424 aaPredicted RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 CLYBLQ8N0X4 340 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 TMEM86AQ8N2M4 240 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 PGBD5Q8N414 524 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 RTL3Q8N8U3 475 aaKnown RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 ERVK-6Q9BXR3 956 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 INTS7Q9NVH2 962 aaKnown RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 PTCH2Q9Y6C5 1203 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 SCAMP3O14828 347 aaKnown RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 MUSKO15146 869 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 PENKP01210 267 aaPredicted RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 ODC1P11926 461 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 FASP25445 335 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 CDC42EP1Q00587 391 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 TSNQ15631 228 aaKnown RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 FGD3Q5JSP0 725 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 PAQR3Q6TCH7 311 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 METTL23Q86XA0 190 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 SGCDQ92629 289 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 LRRC58Q96CX6 371 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 CCDC126Q96EE4 140 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 MYEOVQ96EZ4 313 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 TSPAN17Q96FV3 270 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 FAR2Q96K12 515 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 RNF145Q96MT1 663 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 ANKRD60Q9BZ19 345 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 PAIP1Q9H074 479 aaKnown RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 SLC25A51Q9H1U9 297 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 SLC38A7Q9NVC3 462 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 TBC1D13Q9NVG8 400 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 ZSWIM8A7E2V4 1837 aa11.95□□□□□ -0.5
RBM39-206ENST00000403542 PDCD11Q14690 1871 aaKnown RBP11.95□□□□□ -0.5
RBM39-206ENST00000403542 ZFC3H1O60293 1989 aaKnown RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 BOLA2-SMG1P6H3BVE0 249 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 M0QZ92 97 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 MGEA5O60502 916 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 MMP2P08253 660 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 CD1DP15813 335 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 GGT5P36269 586 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 SH3BGRP55822 239 aaPredicted RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 ESRRGP62508 458 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 PPP4R4Q6NUP7 873 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 TBPL2Q6SJ96 375 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 SLC22A9Q8IVM8 553 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 CALML6Q8TD86 181 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 IGSF8Q969P0 613 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 PRKD2Q9BZL6 878 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 CXorf21Q9HAI6 301 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.94□□□□□ -0.53e-6■■■■□ 19.7
RBM39-206ENST00000403542 ASB1Q9Y576 335 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 CD3EAPO15446 510 aaKnown RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 GLP2RO95838 553 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 PEX11BO96011 259 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 ELK4P28324 431 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 ALDH3B2P48448 385 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 RENBPP51606 427 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 TRAP1Q12931 704 aaKnown RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 INPP5AQ14642 412 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 FAM45BPQ6NSW5 357 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 CAMK1DQ8IU85 385 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 ERI1Q8IV48 349 aaKnown RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 FAM45AQ8TCE6 357 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 THAP11Q96EK4 314 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 IMP4Q96G21 291 aaKnown RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 PPM1MQ96MI6 270 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 RPRD1AQ96P16 312 aaPredicted RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 PTPN18Q99952 460 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 AP5M1Q9H0R1 490 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 CSNK1G1Q9HCP0 422 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 MRPL40Q9NQ50 206 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms