RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 GRAMD4Q6IC98 578 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 CRTC1Q6UUV9 634 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 OR6Y1Q8NGX8 325 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 HEXDCQ8WVB3 486 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 C10orf82Q8WW14 230 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 UBXN10Q96LJ8 280 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 KLHL32Q96NJ5 620 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 UNKQ9C0B0 810 aaKnown RBP25.56■■□□□ 1.68
CPNE1-205ENST00000401607 NPHS2Q9NP85 383 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 DEC1Q9P2X7 70 aa25.56■■□□□ 1.68
CPNE1-205ENST00000401607 KIAA1549LQ6ZVL6 1849 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 UBA6A0AVT1 1052 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-205ENST00000401607 A8MX80 341 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 NDUFS3O75489 264 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 SUOXP51687 545 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 CSHL1Q14406 222 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 ZYG11AQ6WRX3 759 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 TPRG1Q6ZUI0 275 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 USP45Q70EL2 814 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 PPP1R14CQ8TAE6 165 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 RDH11Q8TC12 318 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 ANKRD49Q8WVL7 239 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 SCYL1Q96KG9 808 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 XPR1Q9UBH6 696 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 MID2Q9UJV3 735 aa25.55■■□□□ 1.68
CPNE1-205ENST00000401607 ATXN2Q99700 1313 aaKnown RBP25.55■■□□□ 1.68
CPNE1-205ENST00000401607 MUC22E2RYF6 1773 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-205ENST00000401607 A0A1W2PQ67 120 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-205ENST00000401607 TGDSO95455 350 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 SERPINE1P05121 402 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 TTPAP49638 278 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 KDSRQ06136 332 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 CACNG1Q06432 222 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 ITGA9Q13797 1035 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 GRM2Q14416 872 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 PHTF2Q8N3S3 785 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 RMDN2Q96LZ7 410 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 ZNF576Q9H609 170 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 SLC8A2Q9UPR5 921 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 MED16Q9Y2X0 877 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 REV3LO60673 3130 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 LEFTY1O75610 366 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 CTSLP07711 333 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 TROVE2P10155 538 aaKnown RBP eCLIP25.54■■□□□ 1.68
CPNE1-205ENST00000401607 RALBP11234 206 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 BPIP17213 487 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 LHCGRP22888 699 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 FMO4P31512 558 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 RNF187Q5TA31 235 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-205ENST00000401607 LRRC66Q68CR7 880 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 NAIF1Q69YI7 327 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-205ENST00000401607 CES5AQ6NT32 575 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 CCDC91Q7Z6B0 441 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 ZNF366Q8N895 744 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 RFWD2Q8NHY2 731 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 BIRC8Q96P09 236 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 BRD9Q9H8M2 597 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 THAP1Q9NVV9 213 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 SLC30A1Q9Y6M5 507 aa25.54■■□□□ 1.68
CPNE1-205ENST00000401607 ITM2AO43736 263 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 OR1I1O60431 355 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 SRP72O76094 671 aaKnown RBP25.53■■□□□ 1.68
CPNE1-205ENST00000401607 CCDC166P0CW27 439 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 MYL2P10916 166 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 AARS2Q5JTZ9 985 aaKnown RBP25.53■■□□□ 1.68
CPNE1-205ENST00000401607 FAM151BQ6UXP7 276 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 KXD1Q9BQD3 176 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 POPDC3Q9HBV1 291 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 IL26Q9NPH9 171 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 VPS9D1Q9Y2B5 631 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 MYO9BQ13459 2157 aa25.53■■□□□ 1.68
CPNE1-205ENST00000401607 CCT8L1PA6NM43 557 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 PRAMEF1O95521 474 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 LTA4HP09960 611 aaKnown RBP25.52■■□□□ 1.68
CPNE1-205ENST00000401607 ARRB2P32121 409 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 CA5AP35218 305 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 RUNX3Q13761 415 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 FAM83EQ2M2I3 478 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 ARSIQ5FYB1 569 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 TECRLQ5HYJ1 363 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 LRRC73Q5JTD7 316 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 ATG14Q6ZNE5 492 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 YTHDF3Q7Z739 585 aaKnown RBP25.52■■□□□ 1.68
CPNE1-205ENST00000401607 SFTPA1Q8IWL2 248 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 CBARPQ8N350 705 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-205ENST00000401607 CPA6Q8N4T0 437 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 CCT6BQ92526 530 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 TRIM55Q9BYV6 548 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 MRPL46Q9H2W6 279 aaKnown RBP25.52■■□□□ 1.68
CPNE1-205ENST00000401607 ABCF3Q9NUQ8 709 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 OXSMQ9NWU1 459 aa25.52■■□□□ 1.68
CPNE1-205ENST00000401607 TSPAN11A1L157 253 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 LYPLA1O75608 230 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-205ENST00000401607 LAMP2P13473 410 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 GRK2P25098 689 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 SLC26A3P40879 764 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 OPRD1P41143 372 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 KPNA2P52292 529 aaKnown RBP25.51■■□□□ 1.67
CPNE1-205ENST00000401607 ST8SIA6P61647 398 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms