RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 NT5DC3Q86UY8 548 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 RAVER1Q8IY67 606 aaKnown RBP15.8■□□□□ 0.12
ATG4B-203ENST00000400772 KATNAL2Q8IYT4 538 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 KRT35Q92764 455 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 CCDC74AQ96AQ1 378 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 EID2BQ96D98 161 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 SCARF2Q96GP6 870 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-203ENST00000400772 BRD8Q9H0E9 1235 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 SPATS2LQ9NUQ6 558 aaKnown RBP15.8■□□□□ 0.12
ATG4B-203ENST00000400772 GOLGA6AQ9NYA3 693 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 SEPT10Q9P0V9 454 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 DNPEPQ9ULA0 475 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 SUFUQ9UMX1 484 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 REXO2Q9Y3B8 237 aaKnown RBP15.8■□□□□ 0.12
ATG4B-203ENST00000400772 ENTPD2Q9Y5L3 495 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 DUSP10Q9Y6W6 482 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 ADAMTS20P59510 1910 aa15.8■□□□□ 0.12
ATG4B-203ENST00000400772 hCG_1818297A0A087WSY0 165 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 TCEA3O75764 348 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 NDUFA10O95299 355 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 IVLP07476 585 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 PTPN3P26045 913 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 CD68P34810 354 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 GNPDA1P46926 289 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 NR2C2P49116 596 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 TFDP2Q14188 446 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 HLTFQ14527 1009 aaKnown RBP eCLIP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 PRKD1Q15139 912 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 COL28A1Q2UY09 1125 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 RBM44Q6ZP01 1051 aaKnown RBP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 TMTC1Q8IUR5 882 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 RCOR2Q8IZ40 523 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 NRSN1Q8IZ57 195 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 ATXN7L3BQ96GX2 97 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 COX14Q96I36 57 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 MLPHQ9BV36 600 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 RIOK2Q9BVS4 552 aaKnown RBP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 SLC25A51Q9H1U9 297 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 SUDS3Q9H7L9 328 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 TRNAU1APQ9NX07 287 aaKnown RBP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 CNOT6Q9ULM6 557 aaKnown RBP15.79■□□□□ 0.12
ATG4B-203ENST00000400772 LHX6Q9UPM6 363 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 TMEM98Q9Y2Y6 226 aa15.79■□□□□ 0.12
ATG4B-203ENST00000400772 C1orf232A0A0U1RR37 186 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 A0A1W2PQM1 296 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 ZRANB2O95218 330 aaKnown RBP eCLIP15.78■□□□□ 0.12
ATG4B-203ENST00000400772 FGF1P05230 155 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 AK4P27144 223 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-203ENST00000400772 EIF2S3P41091 472 aaKnown RBP15.78■□□□□ 0.12
ATG4B-203ENST00000400772 LSSP48449 732 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 SPINT3P49223 89 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 CCL7P80098 99 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 WASHC5Q12768 1159 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 GALNT3Q14435 633 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 TBC1D25Q3MII6 688 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 TFDP3Q5H9I0 405 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 CERCAMQ5T4B2 595 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 BZW1Q7L1Q6 419 aaKnown RBP15.78■□□□□ 0.12
ATG4B-203ENST00000400772 KDELC2Q7Z4H8 507 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 TRIM74Q86UV6 250 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 C17orf82Q86X59 251 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-203ENST00000400772 SPATA22Q8NHS9 363 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 SNIP1Q8TAD8 396 aaKnown RBP15.78■□□□□ 0.12
ATG4B-203ENST00000400772 WDR48Q8TAF3 677 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 FGF11Q92914 225 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 PRR11Q96HE9 360 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-203ENST00000400772 TEKT5Q96M29 485 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 ANP32EQ9BTT0 268 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 ADGRE3Q9BY15 652 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 DPEP2Q9H4A9 486 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 POLR1BQ9H9Y6 1135 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 GLOD4Q9HC38 313 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 PLEKHM1Q9Y4G2 1056 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 RNF215Q9Y6U7 377 aa15.78■□□□□ 0.12
ATG4B-203ENST00000400772 ARHGEF17Q96PE2 2063 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-203ENST00000400772 ANKRD11Q6UB99 2663 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-203ENST00000400772 B4DGG1 531 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 DXOO77932 396 aaKnown RBP15.77■□□□□ 0.12
ATG4B-203ENST00000400772 MT-CYBP00156 380 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-203ENST00000400772 PYGLP06737 847 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 ADCY8P40145 1251 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 GABREP78334 506 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 CTBSQ01459 385 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 CDK18Q07002 472 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 SLC14A2Q15849 920 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 C14orf28Q4W4Y0 310 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 HENMT1Q5T8I9 393 aaKnown RBP15.77■□□□□ 0.12
ATG4B-203ENST00000400772 DOK6Q6PKX4 331 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 DAAM2Q86T65 1068 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 OR6C4Q8NGE1 309 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 EXD1Q8NHP7 514 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 TFB1MQ8WVM0 346 aaKnown RBP15.77■□□□□ 0.12
ATG4B-203ENST00000400772 GRAMD1AQ96CP6 724 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 HIC2Q96JB3 615 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 GSDMCQ9BYG8 508 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 LACRTQ9GZZ8 138 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 LRRN3Q9H3W5 708 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 TAAR2Q9P1P5 351 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 APPL1Q9UKG1 709 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms