RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 RPS6KA6Q9UK32 745 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 INVSQ9Y283 1065 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 N6AMT1Q9Y5N5 214 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 H0Y3Z8 333 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 C4BPAP04003 597 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 CCDC166P0CW27 439 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ATP6V1B2P21281 511 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 HNMTP50135 292 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 RAD23AP54725 363 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 TBL3Q12788 808 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 AUHQ13825 339 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 TAF1AQ15573 450 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 PLEKHG6Q3KR16 790 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 LINGO4Q6UY18 593 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 KCNK18Q7Z418 384 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 FAM126BQ8IXS8 530 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 RTL3Q8N8U3 475 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 SIDT2Q8NBJ9 832 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 EMID1Q96A84 441 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 C5orf34Q96MH7 638 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 AARSD1Q9BTE6 412 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 THTPAQ9BU02 230 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 EXOSC4Q9NPD3 245 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 B3GAT2Q9NPZ5 323 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 TRPS1Q9UHF7 1281 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 PCDHGC3Q9UN70 934 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ERAL1O75616 437 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 CER1O95813 267 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 HAPLN1P10915 354 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 OC90Q02509 493 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 TSNQ15631 228 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 TRIM71Q2Q1W2 868 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 RFTN2Q52LD8 501 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 EMC10Q5UCC4 262 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 CES3Q6UWW8 571 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 GPR156Q8NFN8 814 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 KLK6Q92876 244 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 CERS2Q96G23 380 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 RBM18Q96H35 190 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 PDE7BQ9NP56 450 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 PCDH12Q9NPG4 1184 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 FTSJ1Q9UET6 329 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 TLX3O43711 291 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 CCND1P24385 295 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 PIK3R1P27986 724 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 WNT3AP56704 352 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 SLC13A2Q13183 592 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 AGKQ53H12 422 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ZNF549Q6P9A3 640 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 CCNI2Q6ZMN8 369 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 XYLT1Q86Y38 959 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ZBTB10Q96DT7 871 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 C8orf48Q96LL4 319 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 KCTD15Q96SI1 283 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 GBA3Q9H227 469 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 NCANO14594 1321 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 H0YGN5 161 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 TYRP14679 529 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 JUPP14923 745 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 L1CAMP32004 1257 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 UGT1A5P35504 534 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ACTR1BP42025 376 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 GRIA2P42262 883 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ACTR1AP61163 376 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 RPS21P63220 83 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 NOMO3P69849 1222 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 FASTKQ14296 549 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 FBXO43Q4G163 708 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 HECTD2Q5U5R9 776 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ARHGAP17Q68EM7 881 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 C17orf99Q6UX52 265 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 RPAINQ86UA6 219 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 UBR7Q8N806 425 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 FAM46DQ8NEK8 389 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 SMARCD2Q92925 531 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 MTMR8Q96EF0 704 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 UNKQ9C0B0 810 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 IL25Q9H293 177 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 FZD8Q9H461 694 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 CORO1CQ9ULV4 474 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 N4BP2Q86UW6 1770 aaPredicted RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 MAN1A2O60476 641 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 RHOP08100 348 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 ADRA1BP35368 520 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 CASP5P51878 434 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 MANFP55145 182 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 IRX1P78414 480 aaPredicted RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 ADGRF1Q5T601 910 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 LRRTM4Q86VH4 590 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 ZNF461Q8TAF7 563 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 WDR24Q96S15 920 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 EPB41L4BQ9H329 900 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 KCNK4Q9NYG8 393 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 PPP1R11O60927 126 aaPredicted RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 ZNF23P17027 643 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 MYL12AP19105 171 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 SNTA1Q13424 505 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 TAPT1Q6NXT6 567 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 MED27Q6P2C8 311 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms