RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SCARF2Q96GP6 870 aaPredicted RBP14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 RBM41Q96IZ5 413 aaKnown RBP14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 TRIB3Q96RU7 358 aa14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 MLPHQ9BV36 600 aaPredicted RBP14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 CEP41Q9BYV8 373 aa14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 CARS2Q9HA77 564 aaKnown RBP14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 GOLGA6AQ9NYA3 693 aa14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 SEPT10Q9P0V9 454 aa14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 SIRPGQ9P1W8 387 aa14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 CD84Q9UIB8 345 aa14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 MOSPD1Q9UJG1 213 aa14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 TFR2Q9UP52 801 aa14.82□□□□□ -0.04
SMIM11A-203ENST00000399299 IGSF10Q6WRI0 2623 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 C1orf232A0A0U1RR37 186 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 NTN3O00634 580 aaPredicted RBP14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 MTSS1O43312 755 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 NOBOXO60393 691 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 BRINP1O60477 761 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 USP12O75317 370 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 DXOO77932 396 aaKnown RBP14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 CLDN7O95471 211 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 FUCA1P04066 466 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 PECAM1P16284 738 aaPredicted RBP14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 MARCKSL1P49006 195 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 ILF3Q12906 894 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 CERCAMQ5T4B2 595 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 RFLNAQ6ZTI6 216 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 DAAM2Q86T65 1068 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 GAS2L3Q86XJ1 694 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 LSMEM2Q8N112 164 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 FAM46DQ8NEK8 389 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 SNIP1Q8TAD8 396 aaKnown RBP14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 KIAA1524Q8TCG1 905 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 TFB1MQ8WVM0 346 aaKnown RBP14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 SCAMP4Q969E2 229 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 COX14Q96I36 57 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 TEKT5Q96M29 485 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 AGAP3Q96P47 875 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 GSDMCQ9BYG8 508 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 GLOD4Q9HC38 313 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 PKD2L2Q9NZM6 624 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 SUFUQ9UMX1 484 aa14.81□□□□□ -0.04
SMIM11A-203ENST00000399299 ZFC3H1O60293 1989 aaKnown RBP14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 RCCD1A6NED2 376 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 PNLIPP16233 465 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 GLB1P16278 677 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 PTPN3P26045 913 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 CTNNA1P35221 906 aaKnown RBP14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 ACTN2P35609 894 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 LSSP48449 732 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 SPINT3P49223 89 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 COPS2P61201 443 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 ADCY2Q08462 1091 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 PEX6Q13608 980 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 SPIDRQ14159 915 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 HLTFQ14527 1009 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 C14orf28Q4W4Y0 310 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 HENMT1Q5T8I9 393 aaKnown RBP14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 KAZNQ674X7 775 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 IGF2-ASQ6U949 168 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 BBS12Q6ZW61 710 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 NRROSQ86YC3 692 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 CCDC50Q8IVM0 306 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 CCL4L1Q8NHW4 92 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 CCHCR1Q8TD31 782 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 P3H4Q92791 437 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 CCDC74AQ96AQ1 378 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 HIC2Q96JB3 615 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 RIOK2Q9BVS4 552 aaKnown RBP14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 POLR1BQ9H9Y6 1135 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 MAGEE1Q9HCI5 957 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 NFKBIL1Q9UBC1 381 aaPredicted RBP14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 SAE1Q9UBE0 346 aaPredicted RBP14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 APPL1Q9UKG1 709 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 REXO2Q9Y3B8 237 aaKnown RBP14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 ENTPD2Q9Y5L3 495 aa14.8□□□□□ -0.04
SMIM11A-203ENST00000399299 HACD1B0YJ81 288 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 PJA2O43164 708 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 TLX3O43711 291 aaPredicted RBP14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 NUDT21O43809 227 aaKnown RBP14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 GNPDA1P46926 289 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 VAV2P52735 878 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 GABREP78334 506 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 CDK18Q07002 472 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 WASHC5Q12768 1159 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 GALNT3Q14435 633 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 TBC1D25Q3MII6 688 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 RAD9BQ6WBX8 426 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 C17orf82Q86X59 251 aaPredicted RBP14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 PTCD2Q8WV60 388 aaKnown RBP14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 KRT35Q92764 455 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 FGF11Q92914 225 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 QKIQ96PU8 341 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 WDR24Q96S15 920 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 SRPK1Q96SB4 655 aaKnown RBP14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 AGAP2Q99490 1192 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 VAT1Q99536 393 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 CDH19Q9H159 772 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 DPEP2Q9H4A9 486 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 ZFYVE1Q9HBF4 777 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms