RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PCDHGA5Q9Y5G8 931 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PLXNB3Q9ULL4 1909 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LAMA1P25391 3075 aa12.38□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ADAMTS9Q9P2N4 1935 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 A0A1B0GTW7 788 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FADS2P1A8MWK0 482 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CCL22O00626 93 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 BCAT2O15382 392 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GPR39O43194 453 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PCCBP05166 539 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HOXD12P35452 270 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TRIM23P36406 574 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TNNT3P45378 269 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CSNK1EP49674 416 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ARSDP51689 593 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ITGA8P53708 1063 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SESN2P58004 480 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DCDC1P59894 354 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MSS51Q4VC12 460 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ALS2CLQ60I27 953 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 KCTD16Q68DU8 428 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 C8orf74Q6P047 294 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ZDHHC24Q6UX98 284 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HOOK3Q86VS8 718 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SPATS2Q86XZ4 545 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NRSN1Q8IZ57 195 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DCLK2Q8N568 766 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CEP112Q8N8E3 955 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 OR4K2Q8NGD2 314 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SEC14L1Q92503 715 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SNF8Q96H20 258 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DNAJC1Q96KC8 554 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RANBP9Q96S59 729 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TRIM56Q9BRZ2 755 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RIOK2Q9BVS4 552 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 IL26Q9NPH9 171 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SYBUQ9NX95 663 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PKD2L2Q9NZM6 624 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SLC2A6Q9UGQ3 507 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TMPRSS11EQ9UL52 423 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PNMA8BQ9ULN7 279 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TCAF1Q9Y4C2 921 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HS3ST3A1Q9Y663 406 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TMEM131Q92545 1883 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LRP4O75096 1905 aa12.37□□□□□ -0.43
HLA-DQB1-203ENST00000399082 A0A1B0GVT2 93 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CCDC78A2IDD5 438 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RGSL1A5PLK6 1076 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 VILLO15195 856 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 BANF1O75531 89 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MLNP12872 115 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LPOP22079 712 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CD38P28907 300 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 XIAPP98170 497 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SEPT6Q14141 434 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 INPP5AQ14642 412 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MORF4L2Q15014 288 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FNBP1LQ5T0N5 605 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PNCKQ6P2M8 343 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SLC23A3Q6PIS1 610 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NLRP8Q86W28 1048 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 MFSD2AQ8NA29 543 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 OR13J1Q8NGT2 312 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 AP2M1Q96CW1 435 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SIGLEC10Q96LC7 697 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LGR4Q9BXB1 951 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 C1QTNF7Q9BXJ2 289 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FAM83DQ9H4H8 585 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 AASDHPPTQ9NRN7 309 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FKBPLQ9UIM3 349 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CNOT6Q9ULM6 557 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 OR1A2Q9Y585 309 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RALGAPA1Q6GYQ0 2036 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 KNL1Q8NG31 2342 aa12.36□□□□□ -0.43
HLA-DQB1-203ENST00000399082 A6NNZ2 444 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FPGTO14772 594 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CRTAMO95727 393 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 THEGLP0DJG4 465 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ADRA1DP25100 572 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TEAD1P28347 426 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NPY2RP49146 381 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NXPH1P58417 271 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TMPRSS15P98073 1019 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ACVR1Q04771 509 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CBLBQ13191 982 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PEX6Q13608 980 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 STAT4Q14765 748 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SF3A2Q15428 464 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DUOXA1Q1HG43 343 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TRIM61Q5EBN2 209 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DNTTIP2Q5QJE6 756 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TSTD2Q5T7W7 516 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 Q6ZSR6 202 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PTAR1Q7Z6K3 402 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PCGF5Q86SE9 256 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 IQCHQ86VS3 1027 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HEATR4Q86WZ0 1026 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PTCD2Q8WV60 388 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms