RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 MOSPD1Q9UJG1 213 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DNPEPQ9ULA0 475 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SPO11Q9Y5K1 396 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CSNK1G3Q9Y6M4 447 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FREM2Q5SZK8 3169 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 LY6G6EA0A0G2JKS1 128 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 YY2O15391 372 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ABCB7O75027 752 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 RASGRP1O95267 797 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ALPPL2P10696 532 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CTSEP14091 401 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PSMB4P28070 264 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 POLD2P49005 469 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 BLKP51451 505 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CLDN6P56747 220 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 OLIG2Q13516 323 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 RPS6KA1Q15418 735 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SIRPB2Q5JXA9 342 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SEL1L2Q5TEA6 688 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CCDC70Q6NSX1 233 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TRIM74Q86UV6 250 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MARCH9Q86YJ5 346 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FAM71DQ8N9W8 422 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TTC13Q8NBP0 860 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CCHCR1Q8TD31 782 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FERMT1Q9BQL6 677 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TMEM121Q9BTD3 319 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KCNF1Q9H3M0 494 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PHPT1Q9NRX4 125 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ZNF711Q9Y462 761 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DGKBQ9Y6T7 804 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 U3KQA8 63 aa14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GOLGA4Q13439 2230 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PRSS38A1L453 326 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 LMO7DNF2Z398 122 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 INPP4BO15327 924 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 AGTP01019 485 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TNFP01375 233 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CEACAM5P06731 702 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KELP23276 732 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GDF10P55107 478 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DAB2P98082 770 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MPP3Q13368 585 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SLC1A5Q15758 541 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ITPRIPL1Q6GPH6 555 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DOK6Q6PKX4 331 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ZNF765Q7L2R6 523 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TMC3Q7Z5M5 1100 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 NRSN1Q8IZ57 195 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GPR26Q8NDV2 337 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TRIM58Q8NG06 486 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ATL2Q8NHH9 583 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CCL4L1Q8NHW4 92 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SLC35B2Q8TB61 432 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DUSP23Q9BVJ7 150 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TLR10Q9BXR5 811 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GPR63Q9BZJ6 419 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TMEM168Q9H0V1 697 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FAM83DQ9H4H8 585 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PKD2L2Q9NZM6 624 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TMEM98Q9Y2Y6 226 aa14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TPRP12270 2363 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB1-202ENST00000399079 LRP4O75096 1905 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FADS2P1A8MWK0 482 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PDE2AO00408 941 aaPredicted RBP14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TPP1O14773 563 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TNFRSF10CO14798 259 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 RFPL3O75679 317 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 STK10O94804 968 aaKnown RBP14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 EPOP01588 193 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ANXA6P08133 673 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CKMT1AP12532 417 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ACP1P24666 158 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ELOCQ15369 112 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 HENMT1Q5T8I9 393 aaKnown RBP14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ALS2CLQ60I27 953 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ZCCHC8Q6NZY4 707 aaKnown RBP14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ADAMTSL4Q6UY14 1074 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 NLRP8Q86W28 1048 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SLC13A5Q86YT5 568 aaPredicted RBP14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FAM181AQ8N9Y4 354 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TBATAQ96M53 351 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CNTNAP3BQ96NU0 1288 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 APOL2Q9BQE5 337 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FSD1LQ9BXM9 530 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FRMD8Q9BZ67 464 aaPredicted RBP14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CNTNAP3Q9BZ76 1288 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CARS2Q9HA77 564 aaKnown RBP14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 BPIFA1Q9NP55 256 aa14.02□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FAM149AA5PLN7 773 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ANXA9O76027 345 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TEAD1P28347 426 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CXCR5P32302 372 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TNNT3P45378 269 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GEMP55040 296 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SLC35F3Q8IY50 421 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 RAVER1Q8IY67 606 aaKnown RBP14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 FSTL5Q8N475 847 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms