RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ZUFSPQ96AP4 578 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 ASB2Q96Q27 587 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 IL1RL2Q9HB29 575 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 MID1IP1Q9NPA3 183 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 BRCA2P51587 3418 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 PLOD2O00469 737 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 SOCS2O14508 198 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 PIP5K1BO14986 540 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 AKAP10O43572 662 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 ACVR1Q04771 509 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 ZNF354CQ86Y25 554 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 PHYKPLQ8IUZ5 450 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 TWIST2Q8WVJ9 160 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 HOPXQ9BPY8 73 aaPredicted RBP25.54■■□□□ 1.68
COL13A1-203ENST00000398969 CAAP1Q9H8G2 361 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 NDUFAF1Q9Y375 327 aa25.54■■□□□ 1.68
COL13A1-203ENST00000398969 FOXA1P55317 472 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 TBX4P57082 545 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 TNK2Q07912 1038 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 OR4D1Q15615 310 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 LRRC23Q53EV4 343 aaPredicted RBP25.53■■□□□ 1.68
COL13A1-203ENST00000398969 MSANTD2Q6P1R3 559 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 GRIN3AQ8TCU5 1115 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 TCF12Q99081 682 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 CCM2LQ9NUG4 571 aaPredicted RBP25.53■■□□□ 1.68
COL13A1-203ENST00000398969 HSFX1Q9UBD0 423 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 DOCK4Q8N1I0 1966 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 LRRC14BA6NHZ5 514 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 UBXN8O00124 270 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 AZIN1O14977 448 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 GOT2P00505 430 aaKnown RBP25.53■■□□□ 1.68
COL13A1-203ENST00000398969 TYMPP19971 482 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 CAPN3P20807 821 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 ALDH3B2P48448 385 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 YWHAHQ04917 246 aaPredicted RBP25.53■■□□□ 1.68
COL13A1-203ENST00000398969 GRB7Q14451 532 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 VPS26BQ4G0F5 336 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 SLC39A12Q504Y0 691 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 SDHAF4Q5VUM1 108 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 KANK2Q63ZY3 851 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 MON1AQ86VX9 555 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 CD99L2Q8TCZ2 262 aa25.53■■□□□ 1.68
COL13A1-203ENST00000398969 RMND5BQ96G75 393 aaPredicted RBP25.53■■□□□ 1.68
COL13A1-203ENST00000398969 GLP2RO95838 553 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 MTHFD2P13995 350 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 ZNF37AP17032 561 aaPredicted RBP25.52■■□□□ 1.68
COL13A1-203ENST00000398969 HOXD10P28358 340 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 ETFBP38117 255 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 PTPRCAPQ14761 206 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 GEN1Q17RS7 908 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 PRMT9Q6P2P2 845 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 RAB44Q7Z6P3 723 aaPredicted RBP25.52■■□□□ 1.68
COL13A1-203ENST00000398969 MIER2Q8N344 545 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 UROC1Q96N76 676 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 TRMT13Q9NUP7 481 aaKnown RBP25.52■■□□□ 1.68
COL13A1-203ENST00000398969 ABI2Q9NYB9 513 aaPredicted RBP25.52■■□□□ 1.68
COL13A1-203ENST00000398969 PHF24Q9UPV7 400 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 SCML2Q9UQR0 700 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 THSD7BQ9C0I4 1608 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 CEP350Q5VT06 3117 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 A0A0U1RQF3 1178 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 CD3EAPO15446 510 aaKnown RBP25.52■■□□□ 1.68
COL13A1-203ENST00000398969 GJB3O75712 270 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 PAX3P23760 479 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 SUOXP51687 545 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 ATP6V0D1P61421 351 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 SEMA3AQ14563 771 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 PFKFB4Q16877 469 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 RNF180Q86T96 592 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 MINDY1Q8N5J2 469 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 TFAP2CQ92754 450 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 NSUN5Q96P11 429 aaKnown RBP25.52■■□□□ 1.68
COL13A1-203ENST00000398969 ARL5AQ9Y689 179 aa25.52■■□□□ 1.68
COL13A1-203ENST00000398969 AQP12BA6NM10 295 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 H3BMM5 538 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 FXYD1O00168 92 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 ANGPT2O15123 496 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 TRMUO75648 421 aaKnown RBP25.51■■□□□ 1.67
COL13A1-203ENST00000398969 IL31Q6EBC2 164 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 AQP12AQ8IXF9 295 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 DDIASQ8IXT1 998 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 SLC15A3Q8IY34 581 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 GPR150Q8NGU9 434 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 IGSF8Q969P0 613 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 TMIGD2Q96BF3 282 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 KCNA7Q96RP8 456 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 CFHR5Q9BXR6 569 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 TUBB1Q9H4B7 451 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.51■■□□□ 1.67
COL13A1-203ENST00000398969 IGLV3-10A0A075B6K4 115 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 HOXB8P17481 243 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-203ENST00000398969 LPIN1Q14693 890 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 TBCELQ5QJ74 424 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 FIBCD1Q8N539 461 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 RHEBL1Q8TAI7 183 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 BLOC1S5Q8TDH9 187 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 ATOH8Q96SQ7 321 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 TRIM15Q9C019 465 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 POPDC3Q9HBV1 291 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 RSL24D1Q9UHA3 163 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms