RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MGME1Q9BQP7 344 aa12□□□□□ -0.49
TFF3-202ENST00000398431 CDH19Q9H159 772 aa12□□□□□ -0.49
TFF3-202ENST00000398431 SLC25A18Q9H1K4 315 aa12□□□□□ -0.49
TFF3-202ENST00000398431 OCIAD1Q9NX40 245 aa12□□□□□ -0.49
TFF3-202ENST00000398431 KCTD5Q9NXV2 234 aa12□□□□□ -0.49
TFF3-202ENST00000398431 TMEM98Q9Y2Y6 226 aa12□□□□□ -0.49
TFF3-202ENST00000398431 ZFC3H1O60293 1989 aaKnown RBP11.99□□□□□ -0.49
TFF3-202ENST00000398431 SYCE3A1L190 88 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 STMND1H3BQB6 276 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 PSMD11O00231 422 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 DDX3XO00571 662 aaKnown RBP eCLIP11.99□□□□□ -0.491e-8■■■■□ 23.1
TFF3-202ENST00000398431 FZD6O60353 706 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 PGLSO95336 258 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 CPP00450 1065 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 PDHA1P08559 390 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 CCDC172P0C7W6 258 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 THRAP10827 490 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 GZMAP12544 262 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 LIFP15018 202 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 ZNF135P52742 658 aaPredicted RBP11.99□□□□□ -0.49
TFF3-202ENST00000398431 MYL5Q02045 173 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 PTSQ03393 145 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 DPYSL2Q16555 572 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 PYCR3Q53H96 274 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 E4F1Q66K89 784 aaPredicted RBP11.99□□□□□ -0.49
TFF3-202ENST00000398431 TXNRD3NBQ6F5E7 133 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 TMEM71Q6P5X7 295 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 ZNF571Q7Z3V5 609 aaPredicted RBP11.99□□□□□ -0.49
TFF3-202ENST00000398431 BMPERQ8N8U9 685 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 ART4Q93070 314 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 AGAP2Q99490 1192 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 ABCG8Q9H221 673 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 HAUS4Q9H6D7 363 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 AKAP7Q9P0M2 348 aaPredicted RBP11.99□□□□□ -0.49
TFF3-202ENST00000398431 CNOT8Q9UFF9 292 aaKnown RBP11.99□□□□□ -0.49
TFF3-202ENST00000398431 MYO6Q9UM54 1294 aa11.99□□□□□ -0.49
TFF3-202ENST00000398431 PCYT1BQ9Y5K3 369 aaPredicted RBP11.99□□□□□ -0.49
TFF3-202ENST00000398431 UBR5O95071 2799 aaPredicted RBP11.99□□□□□ -0.49
TFF3-202ENST00000398431 TRBV23OR9-2A0A075B6M9 112 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 PPFIA2O75334 1257 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 EML2O95834 649 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 CYP2A6P11509 494 aaPredicted RBP11.98□□□□□ -0.49
TFF3-202ENST00000398431 DESP17661 470 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 CTPS1P17812 591 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 CDK11BP21127 795 aaKnown RBP11.98□□□□□ -0.49
TFF3-202ENST00000398431 IL4RP24394 825 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 PCK1P35558 622 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 HSPA9P38646 679 aaKnown RBP11.98□□□□□ -0.49
TFF3-202ENST00000398431 ACTR1BP42025 376 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 ACTR1AP61163 376 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 TYRO3Q06418 890 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 ZNF235Q14590 738 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 RAET1GQ6H3X3 334 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 PPP1R2P3Q6NXS1 205 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 NLRP8Q86W28 1048 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 TEX26Q8N6G2 289 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 AGBL5Q8NDL9 886 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 SCAMP4Q969E2 229 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 CSPG4P5Q96PW8 444 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 DDA1Q9BW61 102 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 ADNPQ9H2P0 1102 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 SLC39A1Q9NY26 324 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 AIPL1Q9NZN9 384 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 CD84Q9UIB8 345 aa11.98□□□□□ -0.49
TFF3-202ENST00000398431 BSNQ9UPA5 3926 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 LRRC53A6NM62 1247 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ESPNB1AK53 854 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 B4E171 279 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 H3BRJ5 948 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ZW10O43264 779 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 RARAP10276 462 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 TSPAN7P41732 249 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 GPR1P46091 355 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 FASLGP48023 281 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ATP1A2P50993 1020 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 TLE1Q04724 770 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 STX1AQ16623 288 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 SMTNL2Q2TAL5 461 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 BOLA3Q53S33 107 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 RALGPS1Q5JS13 557 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.97□□□□□ -0.49
TFF3-202ENST00000398431 ARMC12Q5T9G4 340 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ANKS6Q68DC2 871 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 BORAQ6PGQ7 559 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 DOK6Q6PKX4 331 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ADAMTSL4Q6UY14 1074 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ARHGAP22Q7Z5H3 698 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 TRIM74Q86UV6 250 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 GAS2L3Q86XJ1 694 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ZNF761Q86XN6 746 aaPredicted RBP11.97□□□□□ -0.49
TFF3-202ENST00000398431 PTRH1Q86Y79 214 aaKnown RBP11.97□□□□□ -0.49
TFF3-202ENST00000398431 CACNA2D3Q8IZS8 1091 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ANKRD20A12PQ8NF67 263 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 COX14Q96I36 57 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 OR2M4Q96R27 311 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 WDR24Q96S15 920 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ZWILCHQ9H900 591 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 ANO10Q9NW15 660 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 KCNK4Q9NYG8 393 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 PILRAQ9UKJ1 303 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms