RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CSTAP01040 98 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 GH2P01242 217 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 PLS3P13797 630 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CYP11B1P15538 503 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 KCNA5P22460 613 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 G0S2P27469 103 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 GPD2P43304 727 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CAPZA2P47755 286 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CDH6P55285 790 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 AP1S2P56377 157 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 PPP3CAQ08209 521 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CLCA4Q14CN2 919 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ACAD10Q6JQN1 1059 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 C3orf33Q6P1S2 294 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 TAF2Q6P1X5 1199 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 RTL4Q6ZR62 310 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 MTDHQ86UE4 582 aaKnown RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 AGGF1Q8N302 714 aaeCLIP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 FBXW8Q8N3Y1 598 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ZMIZ2Q8NF64 920 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 LMO3Q8TAP4 145 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 AKAP1Q92667 903 aaKnown RBP eCLIP6.59□□□□□ -1.352e-10■■■■□ 24.7
TM9SF4-202ENST00000398022 CD101Q93033 1021 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ZFYVE19Q96K21 471 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 UHRF1Q96T88 793 aaPredicted RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 WDR18Q9BV38 432 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 IKZF4Q9H2S9 585 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ETNK1Q9HBU6 452 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 NAALADL1Q9UQQ1 740 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 PCDHGB6Q9Y5F9 930 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ASTN2O75129 1339 aaPredicted RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 AHRRA9YTQ3 701 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 E7ENQ6 273 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 OGTO15294 1046 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CYTIPO60759 359 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 RAB3DO95716 219 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 OTCP00480 354 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CALB2P22676 271 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 AHCYP23526 432 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 NSFP46459 744 aaKnown RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 SERPINB9P50453 376 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 SPCS3P61009 180 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 KCNJ2P63252 427 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF252P-AS1Q0IIN9 211 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 MTFR1Q15390 333 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 DDR2Q16832 855 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 DEFB115Q30KQ5 88 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 C2orf76Q3KRA6 126 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC36A4Q6YBV0 504 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 HAUS6Q7Z4H7 955 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 FBXL13Q8NEE6 735 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 OLIG1Q8TAK6 271 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CAPNS2Q96L46 248 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 FIZ1Q96SL8 496 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 P2RX7Q99572 595 aaKnown RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 MRIQ9BWK5 157 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 IDI2Q9BXS1 227 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 TMEM117Q9H0C3 514 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 BCAS3Q9H6U6 928 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 MLXIPLQ9NP71 852 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 EXOC1LA0A1B0GW35 172 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 GPR39O43194 453 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 PTP4A3O75365 173 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 GJB3O75712 270 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 OAS1P00973 400 aaKnown RBP6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 APOC1P02654 83 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 DARSP14868 501 aaKnown RBP6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 ACADSP16219 412 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 KRT15P19012 456 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 CDH5P33151 784 aaPredicted RBP6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 TAS2R40P59535 323 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 GMFBP60983 142 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 DYRK1AQ13627 763 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 TMED2Q15363 201 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 TRIP13Q15645 432 aaPredicted RBP6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 TMCO2Q7Z6W1 182 aaPredicted RBP6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC47A2Q86VL8 602 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 KIF2BQ8N4N8 673 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 LRRC37BQ96QE4 947 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 PCDHB18PQ96TA0 734 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 CBWD1Q9BRT8 395 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 TRIM54Q9BYV2 358 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 RIBC2Q9H4K1 309 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 TMEM8AQ9HCN3 771 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 CRTAC1Q9NQ79 661 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 LGALS13Q9UHV8 139 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 NOCTQ9UK39 431 aaKnown RBP6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 VPS9D1Q9Y2B5 631 aa6.59□□□□□ -1.36
TM9SF4-202ENST00000398022 ADGRA3Q8IWK6 1321 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 hCG_1807616A0A1W2PRN6 198 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 TCRBV7S2A1N4TA0A589 114 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 DDTLA6NHG4 134 aaPredicted RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ANKRD63C9JTQ0 380 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 DYNC1LI2O43237 492 aaPredicted RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 WFS1O76024 890 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 IFNA16P05015 189 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ERVK-10P10266 1014 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ADRA1BP35368 520 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 BCAP31P51572 246 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms