RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 FSD1LQ9BXM9 530 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 ERVK-6Q9BXR3 956 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 GOLGA2P5Q9HBQ8 144 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 TLR9Q9NR96 1032 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 PMPCBO75439 489 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 FGF4P08620 206 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 CCNA1P78396 465 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 CBX2Q14781 532 aaPredicted RBP17.32■□□□□ 0.36
EWSR1-206ENST00000397938 RABL3Q5HYI8 236 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 GTF2IRD2BQ6EKJ0 949 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 BLOC1S3Q6QNY0 202 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 TMEM207Q6UWW9 146 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 ISCA2Q86U28 154 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 GTF2IRD2Q86UP8 949 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 IFNEQ86WN2 208 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 ATPAF2Q8N5M1 289 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 BPIFB6Q8NFQ5 453 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 CALML6Q8TD86 181 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 MUS81Q96NY9 551 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 CYP2S1Q96SQ9 504 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 CSF3RQ99062 836 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 KCTD14Q9BQ13 255 aaPredicted RBP17.32■□□□□ 0.36
EWSR1-206ENST00000397938 LHPPQ9H008 270 aa17.32■□□□□ 0.36
EWSR1-206ENST00000397938 OAS3Q9Y6K5 1087 aaKnown RBP17.32■□□□□ 0.36
EWSR1-206ENST00000397938 SMIM28A0A1B0GU29 152 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 ABCB7O75027 752 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 CDK14O94921 469 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 JAK1P23458 1154 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 CXCR3P49682 368 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 APLP1P51693 650 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 LIPEQ05469 1076 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 TRIM16LQ309B1 348 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 GPR158Q5T848 1215 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 DCPSQ96C86 337 aaKnown RBP17.31■□□□□ 0.36
EWSR1-206ENST00000397938 ATXN3LQ9H3M9 355 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 RAD21L1Q9H4I0 556 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 PAPPA2Q9BXP8 1791 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 KPNA4O00629 521 aaPredicted RBP17.31■□□□□ 0.36
EWSR1-206ENST00000397938 SYNCRIPO60506 623 aaKnown RBP17.31■□□□□ 0.36
EWSR1-206ENST00000397938 KCNH1O95259 989 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 F9P00740 461 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 MT-ND1P03886 318 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 BDNFP23560 247 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 SHMT2P34897 504 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 BFSP2Q13515 415 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 NFYCQ13952 458 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 PYCR3Q53H96 274 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 RANBP10Q6VN20 620 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 CATSPER4Q7RTX7 472 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 GPRIN1Q7Z2K8 1008 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 CTU1Q7Z7A3 348 aaKnown RBP17.31■□□□□ 0.36
EWSR1-206ENST00000397938 SULF1Q8IWU6 871 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 ARHGAP12Q8IWW6 846 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 SMG8Q8ND04 991 aaKnown RBP17.31■□□□□ 0.36
EWSR1-206ENST00000397938 DNAJB14Q8TBM8 379 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 ZC3H15Q8WU90 426 aaKnown RBP17.31■□□□□ 0.36
EWSR1-206ENST00000397938 MRGPRX2Q96LB1 330 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 ASB2Q96Q27 587 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 SLX1AQ9BQ83 275 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 CNGB3Q9NQW8 809 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 GPRC5DQ9NZD1 345 aa17.31■□□□□ 0.36
EWSR1-206ENST00000397938 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
EWSR1-206ENST00000397938 KRBA1A5PL33 1030 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 AZIN1O14977 448 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 SLC25A27O95847 323 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 USP17L7P0C7H9 530 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 LBPP18428 481 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 TMED10P49755 219 aaKnown RBP17.3■□□□□ 0.36
EWSR1-206ENST00000397938 FOXA1P55317 472 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 SOX4Q06945 474 aaPredicted RBP17.3■□□□□ 0.36
EWSR1-206ENST00000397938 MTA1Q13330 715 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 OXA1LQ15070 435 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 KANK2Q63ZY3 851 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 TMEM53Q6P2H8 277 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 TOP6BLQ8N6T0 577 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 TAMM41Q96BW9 452 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 MAGED4Q96JG8 741 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 MID1IP1Q9NPA3 183 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 KLK14Q9P0G3 267 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 NEU3Q9UQ49 428 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 GINS2Q9Y248 185 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 PPP6CO00743 305 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 HLA-DQB2P05538 268 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 IDUAP35475 653 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 SLC26A3P40879 764 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 EIF2B2P49770 351 aaKnown RBP17.3■□□□□ 0.36
EWSR1-206ENST00000397938 CDKN2DP55273 166 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 KCTD2Q14681 263 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 RPS6KA2Q15349 733 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 GEN1Q17RS7 908 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 CCDC92Q53HC0 331 aaPredicted RBP17.3■□□□□ 0.36
EWSR1-206ENST00000397938 MARCH8Q5T0T0 291 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 KDELC2Q7Z4H8 507 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 PNPLA1Q8N8W4 532 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 PTERQ96BW5 349 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 TUBGCP3Q96CW5 907 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 PPP1R2P1Q96PQ5 205 aa17.3■□□□□ 0.36
EWSR1-206ENST00000397938 ZNF347Q96SE7 839 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms