RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CCNJLQ8IV13 435 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 ZBTB44Q8NCP5 570 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 ASB12Q8WXK4 309 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 ZNF669Q96BR6 464 aaPredicted RBP23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 MFSD3Q96ES6 412 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 ABCG8Q9H221 673 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 FAM83DQ9H4H8 585 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 FKBPLQ9UIM3 349 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 PCDHGA2Q9Y5H1 932 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 RPS6KL1Q9Y6S9 549 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 PLXNA2O75051 1894 aa23.53■■□□□ 1.36
TSPAN4-203ENST00000397397 MEI4A8MW99 385 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 SPAM1P38567 509 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 AGERQ15109 404 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 ANKRD20A4Q4UJ75 823 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 ZDHHC20Q5W0Z9 365 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 ZNF765Q7L2R6 523 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 TMEM135Q86UB9 458 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 OR13J1Q8NGT2 312 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 FOXJ1Q92949 421 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 PEX13Q92968 403 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 SCAMP4Q969E2 229 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 AP2M1Q96CW1 435 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 HSPA12BQ96MM6 686 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 C19orf43Q9BQ61 176 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 CDH19Q9H159 772 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 DUSP15Q9H1R2 295 aaPredicted RBP23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 TREX1Q9NSU2 369 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 THADAQ6YHU6 1953 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 ABCA7Q8IZY2 2146 aa23.52■■□□□ 1.36
TSPAN4-203ENST00000397397 USP1O94782 785 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 POLBP06746 335 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 FAM153BP0C7A2 387 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 PSMA3P25788 255 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 ARSDP51689 593 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 DCDC1P59894 354 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 ACVR1Q04771 509 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 LRRC14Q15048 493 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 WSCD2Q2TBF2 565 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 FAM153CQ494X1 144 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 SLC41A1Q8IVJ1 513 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 TP53I13Q8NBR0 393 aaPredicted RBP23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 MYRIPQ8NFW9 859 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.51■■□□□ 1.356e-6■■□□□ 13.5
TSPAN4-203ENST00000397397 CDKN2AIPNLQ96HQ2 116 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 C9orf72Q96LT7 481 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 TBATAQ96M53 351 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 FCRL3Q96P31 734 aaPredicted RBP23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 PLEKHG4BQ96PX9 1271 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 MYOCQ99972 504 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 RIOK2Q9BVS4 552 aaKnown RBP23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 EBF2Q9HAK2 575 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 FZD3Q9NPG1 666 aa23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 ZNF106Q9H2Y7 1883 aaKnown RBP23.51■■□□□ 1.35
TSPAN4-203ENST00000397397 GLYATL1P3A0A0U1RQE8 302 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 TTC4O95801 387 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 TUBBP07437 444 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 PAMP19021 973 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 HNRNPA2B1P22626 353 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 NUDT1P36639 197 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 SPANXN3Q5MJ09 141 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 FAM151BQ6UXP7 276 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 ARMCX6Q7L4S7 300 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 PALM2Q8IXS6 379 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 HDAC10Q969S8 669 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 LENG8Q96PV6 779 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 IRF2BPLQ9H1B7 796 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 SUDS3Q9H7L9 328 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 IL26Q9NPH9 171 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 NFKBIL1Q9UBC1 381 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 DMTF1Q9Y222 760 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 CCDC162PA2VCL2 907 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 RAD51BO15315 384 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 LILRB5O75023 590 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 PCCBP05166 539 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 AKT2P31751 481 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 PRAMEP78395 509 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 DPTQ07507 201 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 CRYMQ14894 314 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 IRF4Q15306 451 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 PLK5Q496M5 336 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 SPDYCQ5MJ68 293 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 HENMT1Q5T8I9 393 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 PMS2CLQ68D20 193 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 UNC5AQ6ZN44 842 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 OR6P1Q8NGX9 317 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 CENPTQ96BT3 561 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 KLF6Q99612 283 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 SPATA16Q9BXB7 569 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 MBNL1Q9NR56 388 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 APPL1Q9UKG1 709 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 RAB21Q9UL25 225 aa23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-203ENST00000397397 ZCWPW2A0A1B0GU75 182 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 A0A1W2PPC4 97 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 H7C0S8 307 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 CD27P26842 260 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 MC4RP32245 332 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 DHPSP49366 369 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms