RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RGRP47804 291 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 HCAR3P49019 387 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 ZNF135P52742 658 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-208ENST00000397204 LIMK2P53671 638 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 AP1S1P61966 158 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 CYP4F2P78329 520 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 NFKB2Q00653 900 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 IL10RBQ08334 325 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 BIRC2Q13490 618 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 CLCA4Q14CN2 919 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 MAP9Q49MG5 647 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 COLEC12Q5KU26 742 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 ERMARDQ5T6L9 678 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 TMCO4Q5TGY1 634 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 ACAD10Q6JQN1 1059 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 PPP1R2P3Q6NXS1 205 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 BORAQ6PGQ7 559 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 NRROSQ86YC3 692 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 SFTPA2Q8IWL1 248 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 LZTR1Q8N653 840 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 AGBL5Q8NDL9 886 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 CCDC112Q8NEF3 446 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 CCL4L1Q8NHW4 92 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 ZDHHC1Q8WTX9 485 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 CELF6Q96J87 481 aaKnown RBP8.75□□□□□ -1.01
CAPN3-208ENST00000397204 COQ10AQ96MF6 247 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 ZNF599Q96NL3 588 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 MCEEQ96PE7 176 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 AGPAT1Q99943 283 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 FUCA2Q9BTY2 467 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 CINPQ9BW66 212 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-208ENST00000397204 TRIM4Q9C037 500 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 ALG2Q9H553 416 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 TAAR2Q9P1P5 351 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 TUBD1Q9UJT1 453 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 DOPEY2Q9Y3R5 2298 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 ARHGEF17Q96PE2 2063 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-208ENST00000397204 PRRC2CQ9Y520 2896 aaKnown RBP8.74□□□□□ -1.01
CAPN3-208ENST00000397204 A8MX80 341 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 AGRPO00253 132 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 EPHB6O15197 1021 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 HTRA2O43464 458 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-208ENST00000397204 CCDC172P0C7W6 258 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 ERCC2P18074 760 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 TEAD1P28347 426 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 CSTF2P33240 577 aaKnown RBP eCLIP8.74□□□□□ -1.01
CAPN3-208ENST00000397204 GPC1P35052 558 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 KLK7P49862 253 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 SCNN1BP51168 640 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 MAZP56270 477 aaKnown RBP8.74□□□□□ -1.01
CAPN3-208ENST00000397204 CTBSQ01459 385 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 TLE1Q04724 770 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 KRT31Q15323 416 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 CDKAL1Q5VV42 579 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 NLRP8Q86W28 1048 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 PSTKQ8IV42 348 aaKnown RBP8.74□□□□□ -1.01
CAPN3-208ENST00000397204 ARHGAP12Q8IWW6 846 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 MCOLN2Q8IZK6 566 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 PELI3Q8N2H9 469 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 IL22RA1Q8N6P7 574 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 NEK11Q8NG66 645 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 OR4D9Q8NGE8 314 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 ZNF564Q8TBZ8 553 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-208ENST00000397204 HTR3CQ8WXA8 447 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 CATSPER2Q96P56 530 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 NUDT22Q9BRQ3 303 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 DDA1Q9BW61 102 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 FRMD8Q9BZ67 464 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-208ENST00000397204 PARVAQ9NVD7 372 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 PDP2Q9P2J9 529 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 B4GALT6Q9UBX8 382 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 AP4E1Q9UPM8 1137 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 SIK3Q9Y2K2 1263 aa8.74□□□□□ -1.01
CAPN3-208ENST00000397204 USP9XQ93008 2570 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 IGHV1OR21-1A0A087WYE8 117 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 LRRC10BA6NIK2 292 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 B4E171 279 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 PSMD11O00231 422 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 DFFAO00273 331 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 PPM1DO15297 605 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SOCS5O75159 536 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 RNF8O76064 485 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 HEXIM1O94992 359 aaKnown RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 IL2RAP01589 272 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 IVLP07476 585 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 VSIG8P0DPA2 414 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 CYP2A6P11509 494 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 VIPR1P32241 457 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 UGT1A3P35503 534 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 HSPA9P38646 679 aaKnown RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 ADCY8P40145 1251 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 TSPAN7P41732 249 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 CCR10P46092 362 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 GNPDA1P46926 289 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 ARSDP51689 593 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 GPLD1P80108 840 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 OGDHQ02218 1023 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 KCNAB2Q13303 367 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 LBRQ14739 615 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms