RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 KIF5AQ12840 1032 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 ZBTB17Q13105 803 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 LRP8Q14114 963 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 CDKN3Q16667 212 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 CCDC181Q5TID7 509 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 KAZNQ674X7 775 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 KDM7AQ6ZMT4 941 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 TAF8Q7Z7C8 310 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 KIAA1328Q86T90 577 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 TSPAN33Q86UF1 283 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 SLC35F3Q8IY50 421 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 HAUS1Q96CS2 278 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 PDXPQ96GD0 296 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 AGAP3Q96P47 875 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 PPP1R2P1Q96PQ5 205 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 FRMD8Q9BZ67 464 aaPredicted RBP13.9□□□□□ -0.18
SEC13-204ENST00000397099 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 GLOD4Q9HC38 313 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 MAGEE1Q9HCI5 957 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 CYP4F12Q9HCS2 524 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 FGF22Q9HCT0 170 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 GOLGA6AQ9NYA3 693 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 SEPT10Q9P0V9 454 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 SLC17A4Q9Y2C5 497 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 HYOU1Q9Y4L1 999 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 APC2O95996 2303 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 ASXL3Q9C0F0 2248 aa13.9□□□□□ -0.18
SEC13-204ENST00000397099 C1orf232A0A0U1RR37 186 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 GPR89AB7ZAQ6 455 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 TJP3O95049 919 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 CEACAM5P06731 702 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 GPR89BP0CG08 455 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 MYF5P13349 255 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 GLB1P16278 677 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 CTNNA2P26232 953 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 RWDD2BP57060 319 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 GSDMDP57764 484 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 QPCTQ16769 361 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 PDPK2PQ6A1A2 396 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 GUSBP11Q6P575 273 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 OGFOD3Q6PK18 319 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 NPNTQ6UXI9 565 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 RBM44Q6ZP01 1051 aaKnown RBP13.89□□□□□ -0.19
SEC13-204ENST00000397099 BBS12Q6ZW61 710 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 PDZD3Q86UT5 571 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 GAS2L3Q86XJ1 694 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEC13-204ENST00000397099 GPR156Q8NFN8 814 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 GPBAR1Q8TDU6 330 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 TADA1Q96BN2 335 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 SCARF2Q96GP6 870 aaPredicted RBP13.89□□□□□ -0.19
SEC13-204ENST00000397099 HIC2Q96JB3 615 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 LGR4Q9BXB1 951 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 ABCG8Q9H221 673 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 FAM83DQ9H4H8 585 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 RMI1Q9H9A7 625 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 ZFYVE1Q9HBF4 777 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEC13-204ENST00000397099 VPS18Q9P253 973 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 NFKBIL1Q9UBC1 381 aaPredicted RBP13.89□□□□□ -0.19
SEC13-204ENST00000397099 FAM153AQ9UHL3 310 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 MOSPD1Q9UJG1 213 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 FAM208BQ5VWN6 2430 aa13.89□□□□□ -0.19
SEC13-204ENST00000397099 RP1P56715 2156 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 MIF4GDA9UHW6 222 aaKnown RBP13.88□□□□□ -0.19
SEC13-204ENST00000397099 NUDT21O43809 227 aaKnown RBP13.88□□□□□ -0.19
SEC13-204ENST00000397099 STK10O94804 968 aaKnown RBP13.88□□□□□ -0.19
SEC13-204ENST00000397099 NDST3O95803 873 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 PTPN3P26045 913 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 MLLT3P42568 568 aaPredicted RBP13.88□□□□□ -0.19
SEC13-204ENST00000397099 SPINT3P49223 89 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 DCDC1P59894 354 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 ZDHHC20Q5W0Z9 365 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 RNF10Q8N5U6 811 aaKnown RBP13.88□□□□□ -0.19
SEC13-204ENST00000397099 UBL4BQ8N7F7 174 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 FAM46DQ8NEK8 389 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 HTR3CQ8WXA8 447 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 LRRC45Q96CN5 670 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 QKIQ96PU8 341 aaKnown RBP eCLIP13.88□□□□□ -0.19
SEC13-204ENST00000397099 TRIB3Q96RU7 358 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 ZSCAN5AQ9BUG6 496 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 CARS2Q9HA77 564 aaKnown RBP13.88□□□□□ -0.19
SEC13-204ENST00000397099 HACD3Q9P035 362 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 GULP1Q9UBP9 304 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 APPL1Q9UKG1 709 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 AMFRQ9UKV5 643 aa13.88□□□□□ -0.19
SEC13-204ENST00000397099 A0A087WV48 116 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 GOLGA6L9A6NEM1 432 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 CLDN7O95471 211 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 ACTN2P35609 894 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 MPP3Q13368 585 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 SPIDRQ14159 915 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 IHHQ14623 411 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 CLPPQ16740 277 aaPredicted RBP13.87□□□□□ -0.19
SEC13-204ENST00000397099 C14orf28Q4W4Y0 310 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 HENMT1Q5T8I9 393 aaKnown RBP13.87□□□□□ -0.19
SEC13-204ENST00000397099 ITPRIPL1Q6GPH6 555 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 IGF2-ASQ6U949 168 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 LRRC69Q6ZNQ3 347 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms