RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 PCSK4Q6UW60 755 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 RAB11FIP2Q7L804 512 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 SPRED1Q7Z699 444 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 CNTD1Q8N815 330 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 PATE1Q8WXA2 126 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 AP2M1Q96CW1 435 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 TDRD1Q9BXT4 1180 aaKnown RBP18.78■□□□□ 0.6
MCF2L-207ENST00000397024 DPH1Q9BZG8 443 aa18.78■□□□□ 0.6
MCF2L-207ENST00000397024 TRNAU1APQ9NX07 287 aaKnown RBP18.78■□□□□ 0.6
MCF2L-207ENST00000397024 KCNK1O00180 336 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 AGRPO00253 132 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 PLD2O14939 933 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 CBFA2T2O43439 604 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 AKR1B10O60218 316 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 CLDN7O95471 211 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 PNLIPP16233 465 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 PTMSP20962 102 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 CES1P23141 567 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 UGT1A5P35504 534 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 ADCY8P40145 1251 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 GPR1P46091 355 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 EPHB1P54762 984 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 CTBSQ01459 385 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 ZFP36L1Q07352 338 aaKnown RBP18.77■□□□□ 0.6
MCF2L-207ENST00000397024 ZFYVE27Q5T4F4 411 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 ADAMTSL4Q6UY14 1074 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 CLEC14AQ86T13 490 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 TRIM74Q86UV6 250 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 FBXO39Q8N4B4 442 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 ARL14Q8N4G2 192 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 PLD5Q8N7P1 536 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 CCNYQ8ND76 341 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 SCARF2Q96GP6 870 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-207ENST00000397024 WDR24Q96S15 920 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 RIOK2Q9BVS4 552 aaKnown RBP18.77■□□□□ 0.6
MCF2L-207ENST00000397024 DEF6Q9H4E7 631 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 ABHD10Q9NUJ1 306 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 AMACRQ9UHK6 382 aa18.77■□□□□ 0.6
MCF2L-207ENST00000397024 NUDT21O43809 227 aaKnown RBP18.76■□□□□ 0.59
MCF2L-207ENST00000397024 ECEL1O95672 775 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 IVLP07476 585 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 CCKBRP32239 447 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 OR1D5P58170 312 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 ILF3Q12906 894 aaKnown RBP eCLIP18.76■□□□□ 0.59
MCF2L-207ENST00000397024 ZBTB17Q13105 803 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 TRIM14Q14142 442 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 SKOR2Q2VWA4 1001 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-207ENST00000397024 ARHGAP40Q5TG30 622 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 SLC30A9Q6PML9 568 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 NLRP8Q86W28 1048 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 CCDC13Q8IYE1 715 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 NDUFAF2Q8N183 169 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 LPCAT1Q8NF37 534 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 ZDHHC1Q8WTX9 485 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 SLC39A7Q92504 469 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 HDAC11Q96DB2 347 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 GSDMCQ9BYG8 508 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 NHEJ1Q9H9Q4 299 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-207ENST00000397024 PCDH9Q9HC56 1237 aa18.76■□□□□ 0.59
MCF2L-207ENST00000397024 SCN8AQ9UQD0 1980 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 TEX51A0A1B0GUA7 166 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 LRRD1A4D1F6 860 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 CAPN8A6NHC0 703 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 ATXN7O15265 892 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-207ENST00000397024 ITGA2BP08514 1039 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 KRT10P13645 584 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 ZNF30P17039 623 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 MX2P20592 715 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 SLC5A2P31639 672 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 CD86P42081 329 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 PPIDQ08752 370 aaKnown RBP18.75■□□□□ 0.59
MCF2L-207ENST00000397024 QPCTQ16769 361 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 BROXQ5VW32 411 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 NPNTQ6UXI9 565 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 B4GALNT4Q76KP1 1039 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 ZNF765Q7L2R6 523 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 RNF214Q8ND24 703 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 KIAA1524Q8TCG1 905 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 COX14Q96I36 57 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 TMEM74Q96NL1 305 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 STRADBQ9C0K7 418 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 SEMA6CQ9H3T2 930 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 ZNHIT6Q9NWK9 470 aaKnown RBP18.75■□□□□ 0.59
MCF2L-207ENST00000397024 LCMT1Q9UIC8 334 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 CNOT6Q9ULM6 557 aaKnown RBP18.75■□□□□ 0.59
MCF2L-207ENST00000397024 HYOU1Q9Y4L1 999 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 HEY1Q9Y5J3 304 aa18.75■□□□□ 0.59
MCF2L-207ENST00000397024 PCYT1BQ9Y5K3 369 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-207ENST00000397024 HELZ2Q9BYK8 2649 aaKnown RBP18.74■□□□□ 0.59
MCF2L-207ENST00000397024 PIEZO2Q9H5I5 2752 aa18.74■□□□□ 0.59
MCF2L-207ENST00000397024 TMX2-CTNND1H3BSU7 103 aa18.74■□□□□ 0.59
MCF2L-207ENST00000397024 PPM1DO15297 605 aa18.74■□□□□ 0.59
MCF2L-207ENST00000397024 INPP4BO15327 924 aa18.74■□□□□ 0.59
MCF2L-207ENST00000397024 MFAP3LO75121 409 aa18.74■□□□□ 0.59
MCF2L-207ENST00000397024 C1QL1O75973 258 aa18.74■□□□□ 0.59
MCF2L-207ENST00000397024 MTA2O94776 668 aa18.74■□□□□ 0.59
MCF2L-207ENST00000397024 MLLT3P42568 568 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-207ENST00000397024 TMPRSS3P57727 454 aa18.74■□□□□ 0.59
MCF2L-207ENST00000397024 RPL26P61254 145 aaKnown RBP18.74■□□□□ 0.59
MCF2L-207ENST00000397024 CLN3Q13286 438 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms