RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 KLHL8Q9P2G9 620 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 RSPH14Q9UHP6 348 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 SLCO3A1Q9UIG8 710 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 GPSM3Q9Y4H4 160 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 GOLGA4Q13439 2230 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 NYNRINQ9P2P1 1898 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 A0A1W2PPM1 405 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 PSMD3O43242 534 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 TNFSF14O43557 240 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 TYROBPO43914 113 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 MAFKO60675 156 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 RNASEH2AO75792 299 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 FAM155BO75949 473 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 CNTN5O94779 1100 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 SUN1O94901 812 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 POLD3Q15054 466 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 TFAP2DQ7Z6R9 452 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 PRPF39Q86UA1 669 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 SPATS2Q86XZ4 545 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 APCDD1Q8J025 514 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 MPP5Q8N3R9 675 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 AADATQ8N5Z0 425 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 ANKRD42Q8N9B4 389 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 OR2T34Q8NGX1 318 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 GSDMBQ8TAX9 411 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 NSMCE1Q8WV22 266 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 TEKT5Q96M29 485 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 SMC6Q96SB8 1091 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 FAM129BQ96TA1 746 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 ACE2Q9BYF1 805 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 CEP41Q9BYV8 373 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 HAUS2Q9NVX0 235 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 IPO11Q9UI26 975 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 ZNF180Q9UJW8 692 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 SMG1Q96Q15 3661 aaKnown RBP17.52■□□□□ 0.4
TNFSF13-205ENST00000396545 LRRC72A6NJI9 287 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 DFNA5O60443 496 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 CCNB1P14635 433 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 SLC8A1P32418 973 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 CD68P34810 354 aaPredicted RBP17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 PAPOLAP51003 745 aaKnown RBP17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 C21orf59P57076 290 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 ZBTB17Q13105 803 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 LRRC14Q15048 493 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 KCTD11Q693B1 232 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 CCNJLQ8IV13 435 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 STAMBPL1Q96FJ0 436 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 RPL10LQ96L21 214 aaKnown RBP17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 IL12RB2Q99665 862 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 OMDQ99983 421 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 NOL6Q9H6R4 1146 aaKnown RBP17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 NDFIP2Q9NV92 336 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 TP53BP1Q12888 1972 aaPredicted RBP17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 DOCK4Q8N1I0 1966 aa17.52■□□□□ 0.39
TNFSF13-205ENST00000396545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 IQANK1A0A1B0GTG1 560 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 A0A1B0GTQ1 180 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 ILVBLA1L0T0 632 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 SDR42E2A6NKP2 422 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 FAM159BA6NKW6 160 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 GOLGA8CPA6NN73 597 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 AP2A1O95782 977 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 PSMD8P48556 350 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 STK19P49842 368 aaPredicted RBP17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 RENBPP51606 427 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 ADPRHP54922 357 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 IL9RQ01113 521 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 ZNF177Q13360 481 aaPredicted RBP17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 PRPSAP1Q14558 356 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 TMCO4Q5TGY1 634 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 RNF219Q5W0B1 726 aaPredicted RBP17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 SLC26A11Q86WA9 606 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 LRRC34Q8IZ02 419 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 STK40Q8N2I9 435 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 MGARPQ8TDB4 240 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 PTPRN2Q92932 1015 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 ALKBH8Q96BT7 664 aaKnown RBP17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 MRRFQ96E11 262 aaKnown RBP17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 ZNF599Q96NL3 588 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 FAM107BQ9H098 131 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 MOCS1Q9NZB8 636 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 DKK4Q9UBT3 224 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 TBC1D30Q9Y2I9 924 aa17.51■□□□□ 0.39
TNFSF13-205ENST00000396545 AP3B1O00203 1094 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 PIAS1O75925 651 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 ASMTLO95671 621 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 ADH1BP00325 375 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 WNT1P04628 370 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 INHBAP08476 426 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 C5AR1P21730 350 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 MZF1P28698 734 aaPredicted RBP17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 CCR5P51681 352 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 WDR4P57081 412 aaKnown RBP17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 IL10RBQ08334 325 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 SERINC3Q13530 473 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 SLC12A1Q13621 1099 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 ELAVL3Q14576 367 aaKnown RBP17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 INAVAQ3KP66 663 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 LRRC6Q86X45 466 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 CIR1Q86X95 450 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms