RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 WNT7BP56706 349 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 HADHQ16836 314 aaKnown RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 ZNF568Q3ZCX4 644 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 SPATS1Q496A3 300 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 C6orf10Q5SRN2 563 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 TYW3Q6IPR3 259 aaKnown RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 DNAJC24Q6P3W2 148 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 HIPK1Q86Z02 1210 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 TMEM161BQ8NDZ6 487 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 HM13Q8TCT9 377 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 CA5BP1Q8WTZ4 195 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 SGCDQ92629 289 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 DLG3Q92796 817 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 TESCQ96BS2 214 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 SH3YL1Q96HL8 342 aaPredicted RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 SLC29A1Q99808 456 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 TMEM245Q9H330 911 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 AAASQ9NRG9 546 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 SEPT9Q9UHD8 586 aaPredicted RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 LRFN2Q9ULH4 789 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 CFL2Q9Y281 166 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 PCDHB4Q9Y5E5 795 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 RLFQ13129 1914 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 NR5A2O00482 541 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 FSCN2O14926 492 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 PDE9AO76083 593 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 MTA2O94776 668 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 ATP5BP06576 529 aaKnown RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 CYP11B1P15538 503 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 GLRA2P23416 452 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 MYL6P60660 151 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 MERTKQ12866 999 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 ORC1Q13415 861 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 MTMR1Q13613 665 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 INSCQ1MX18 579 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 TMEM198Q66K66 360 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 ERMP1Q7Z2K6 904 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 TDHQ8IZJ6 230 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 MIER2Q8N344 545 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 CCNYQ8ND76 341 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 ACCSQ96QU6 501 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 TAAR1Q96RJ0 339 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 C12orf57Q99622 126 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 NAT9Q9BTE0 207 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 PI4K2AQ9BTU6 479 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 CYP4F12Q9HCS2 524 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 COX16Q9P0S2 106 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 STOML2Q9UJZ1 356 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 RGSL1A5PLK6 1076 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 HTRA2O43464 458 aaPredicted RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 POU2F1P14859 743 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 KCNC1P48547 511 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 CYP1B1Q16678 543 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 SCML4Q8N228 414 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 ZCCHC9Q8N567 271 aaKnown RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 CCDC185Q8N715 623 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 CELF2-AS1Q8N7Q2 184 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 ZNF614Q8N883 585 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 OR6C4Q8NGE1 309 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 PXYLP1Q8TE99 480 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 SOCS4Q8WXH5 440 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 SERAC1Q96JX3 654 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 SPRTNQ9H040 489 aaPredicted RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 PPIL3Q9H2H8 161 aaKnown RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 IFT22Q9H7X7 185 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 PCDHB16Q9NRJ7 776 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 TAS2R9Q9NYW1 312 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.41□□□□□ -1.06
NDE1-202ENST00000396355 FEM1BQ9UK73 627 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 VPS9D1Q9Y2B5 631 aa8.41□□□□□ -1.06
NDE1-202ENST00000396355 GOLGA4Q13439 2230 aaKnown RBP8.4□□□□□ -1.06
NDE1-202ENST00000396355 LCTP09848 1927 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 ATP6AP2A0A1C7CYW4 349 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 LRRC72A6NJI9 287 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 PLOD2O00469 737 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 DYNC1LI2O43237 492 aaPredicted RBP8.4□□□□□ -1.06
NDE1-202ENST00000396355 PEX10O60683 326 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 FAM20BO75063 409 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 ATP6AP2O75787 350 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 TNNI3P19429 210 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 POLR2BP30876 1174 aaKnown RBP8.4□□□□□ -1.06
NDE1-202ENST00000396355 SLC7A2P52569 658 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 MCCD1P59942 119 aaPredicted RBP8.4□□□□□ -1.06
NDE1-202ENST00000396355 CYP4F8P98187 520 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 POU4F1Q01851 419 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
NDE1-202ENST00000396355 PGM5Q15124 567 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 NDUFAF5Q5TEU4 345 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 FAM160B2Q86V87 743 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 ZNF354CQ86Y25 554 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 SYNPOQ8N3V7 929 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 TBC1D19Q8N5T2 526 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 CANT1Q8WVQ1 401 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 BCL7BQ9BQE9 202 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 CEP41Q9BYV8 373 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 TLE6Q9H808 572 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 C1orf112Q9NSG2 853 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 FAM49BQ9NUQ9 324 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 SLC9A2Q9UBY0 812 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms