RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SIGLEC14Q08ET2 396 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 FNDC3BQ53EP0 1204 aaKnown RBP15.1■□□□□ 0.01
SCAF11-204ENST00000395454 CCDC91Q7Z6B0 441 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 CHPFQ8IZ52 775 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 CENPLQ8N0S6 344 aaPredicted RBP15.1■□□□□ 0.01
SCAF11-204ENST00000395454 RFWD2Q8NHY2 731 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 LRRC37BQ96QE4 947 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 TBC1D17Q9HA65 648 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 KCNK4Q9NYG8 393 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 MID2Q9UJV3 735 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 HS3ST2Q9Y278 367 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 FCF1Q9Y324 198 aaKnown RBP15.1■□□□□ 0.01
SCAF11-204ENST00000395454 MTF2Q9Y483 593 aaPredicted RBP15.1■□□□□ 0.01
SCAF11-204ENST00000395454 TARM1B6A8C7 271 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 WISP3O95389 354 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SRPRAP08240 638 aaKnown RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 NEFHP12036 1026 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SRCP12931 536 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 CPA3P15088 417 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 TARSP26639 723 aaKnown RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 KIR2DL1P43626 348 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 ARSDP51689 593 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 ZNF140P52738 457 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 IRF9Q00978 393 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SLC20A2Q08357 652 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 OVGP1Q12889 678 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 STX3Q13277 289 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 ZNF234Q14588 700 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 USP10Q14694 798 aaKnown RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 FBXO43Q4G163 708 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 TAF1BQ53T94 588 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 FAM91A1Q658Y4 838 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SERPINA13PQ6UXR4 307 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 ZNF366Q8N895 744 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 STYXQ8WUJ0 223 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 EDAQ92838 391 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 MRGPRX3Q96LB0 322 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 GPR78Q96P69 363 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 C20orf27Q9GZN8 174 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 NMRAL1Q9HBL8 299 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 LTB4R2Q9NPC1 389 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 ZNF358Q9NW07 568 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 HCN2Q9UL51 889 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 CORO1CQ9ULV4 474 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 FAM170BA6NMN3 283 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 WASH3PC4AMC7 463 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SMAD6O43541 496 aaKnown RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 RPP40O75818 363 aaKnown RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 STMN1P16949 149 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SETDB1Q15047 1291 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 NCEH1Q6PIU2 408 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 C10orf107Q8IVU9 208 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 CEP97Q8IW35 865 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SKA1Q96BD8 255 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 MYO19Q96H55 970 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 ACOX2Q99424 681 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 TM6SF2Q9BZW4 377 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SCUBE2Q9NQ36 999 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 CACNA2D2Q9NY47 1150 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 THAP10Q9P2Z0 257 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-204ENST00000395454 TLK1Q9UKI8 766 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 SLC8A2Q9UPR5 921 aa15.09■□□□□ 0.01
SCAF11-204ENST00000395454 A0A087X1B8 175 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 BNIP3LO60238 219 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 H2AFYO75367 372 aaKnown RBP15.08■□□□□ 0
SCAF11-204ENST00000395454 HAUS5O94927 633 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 S1PR4O95977 384 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 SBK3P0C264 359 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 OGNP20774 298 aaKnown RBP15.08■□□□□ 0
SCAF11-204ENST00000395454 GMPRP36959 345 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 IL12RB1P42701 662 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 TAS2R39P59534 338 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 NCALDP61601 193 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 GALNT3Q14435 633 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 TYSND1Q2T9J0 566 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 METTL3Q86U44 580 aaKnown RBP15.08■□□□□ 0
SCAF11-204ENST00000395454 SLC41A1Q8IVJ1 513 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 FLCNQ8NFG4 579 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 RPLP0P6Q8NHW5 317 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 HDAC10Q969S8 669 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 ERP27Q96DN0 273 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 EXOC2Q96KP1 924 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 OMDQ99983 421 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 MYLK2Q9H1R3 596 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 NLE1Q9NVX2 485 aaPredicted RBP15.08■□□□□ 0
SCAF11-204ENST00000395454 ACOT9Q9Y305 439 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 WDFY4Q6ZS81 3184 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 TECTAO75443 2155 aa15.08■□□□□ 0
SCAF11-204ENST00000395454 TTC34A8MYJ7 566 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 AURKAO14965 403 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 FZD6O60353 706 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 UNC5CO95185 931 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 CRTAMO95727 393 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 CHRNB1P11230 501 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 HLA-EP13747 358 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ALOX15P16050 662 aaPredicted RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 KCNA4P22459 653 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 SLC26A3P40879 764 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 WASP42768 502 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 CSNK1DP48730 415 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms