RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 EGFLAMQ63HQ2 1017 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 CCDC121Q6ZUS5 278 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 RAPH1Q70E73 1250 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 GLT6D1Q7Z4J2 308 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 PTAR1Q7Z6K3 402 aaPredicted RBP19.27■□□□□ 0.67
LMNB1-202ENST00000395354 ZNF687Q8N1G0 1237 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 ZNF513Q8N8E2 541 aaPredicted RBP19.27■□□□□ 0.67
LMNB1-202ENST00000395354 ACVR1CQ8NER5 493 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 TSPAN17Q96FV3 270 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 TBATAQ96M53 351 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 C19orf43Q9BQ61 176 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 FOXQ1Q9C009 403 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 LMAN1LQ9HAT1 526 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 ZDHHC4Q9NPG8 344 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 ACOT9Q9Y305 439 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 SPO11Q9Y5K1 396 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 A0A087X1B8 175 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 IGSF6O95976 241 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 S1PR4O95977 384 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 TOP3BO95985 862 aaKnown RBP19.26■□□□□ 0.67
LMNB1-202ENST00000395354 GOT2P00505 430 aaKnown RBP19.26■□□□□ 0.67
LMNB1-202ENST00000395354 CHRNB1P11230 501 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 SRCP12931 536 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 LPOP22079 712 aaPredicted RBP19.26■□□□□ 0.67
LMNB1-202ENST00000395354 VASPP50552 380 aaPredicted RBP19.26■□□□□ 0.67
LMNB1-202ENST00000395354 DLG2Q15700 870 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 CHI3L2Q15782 390 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 FNDC3BQ53EP0 1204 aaKnown RBP19.26■□□□□ 0.67
LMNB1-202ENST00000395354 FASTKD1Q53R41 847 aaKnown RBP19.26■□□□□ 0.67
LMNB1-202ENST00000395354 DGKKQ5KSL6 1271 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 ARMC12Q5T9G4 340 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 C16orf46Q6P387 395 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 TRIM67Q6ZTA4 783 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 SLC41A1Q8IVJ1 513 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 OTUD6BQ8N6M0 293 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 KDM1BQ8NB78 822 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 OR4L1Q8NH43 312 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 RDH11Q8TC12 318 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 CCT6BQ92526 530 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 MYO19Q96H55 970 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 CDKN2AIPNLQ96HQ2 116 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 ELMO2Q96JJ3 720 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 ACOX2Q99424 681 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 CEP44Q9C0F1 390 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 FBXO6Q9NRD1 293 aaPredicted RBP19.26■□□□□ 0.67
LMNB1-202ENST00000395354 COPG2Q9UBF2 871 aa19.26■□□□□ 0.67
LMNB1-202ENST00000395354 CCDC162PA2VCL2 907 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 NPC1O15118 1278 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 CD3EAPO15446 510 aaKnown RBP19.25■□□□□ 0.67
LMNB1-202ENST00000395354 HTRA2O43464 458 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-202ENST00000395354 PGLSO95336 258 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 F7P08709 466 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-202ENST00000395354 SLC35E2BP0CK96 405 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 ALDH3A1P30838 453 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 SLC12A2P55011 1212 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 MRPS21P82921 87 aaKnown RBP19.25■□□□□ 0.67
LMNB1-202ENST00000395354 TMPRSS15P98073 1019 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 TSNAXIP1Q2TAA8 658 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 ATXN7L2Q5T6C5 722 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-202ENST00000395354 CNSTQ6PJW8 725 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 AFTPHQ6ULP2 937 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 SERPINA13PQ6UXR4 307 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 TRPM8Q7Z2W7 1104 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 SDCCAG8Q86SQ7 713 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-202ENST00000395354 CHPFQ8IZ52 775 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 MDGA1Q8NFP4 955 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 OR13C4Q8NGS5 318 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 OMDQ99983 421 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 MECRQ9BV79 373 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 C1QTNF1Q9BXJ1 281 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 TRIM55Q9BYV6 548 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 MAGEE1Q9HCI5 957 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 CATSPERZQ9NTU4 200 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 SLC8A2Q9UPR5 921 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 USH1CQ9Y6N9 552 aa19.25■□□□□ 0.67
LMNB1-202ENST00000395354 TTC34A8MYJ7 566 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 WASH3PC4AMC7 463 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 SNNO75324 88 aaPredicted RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 PIRTP0C851 137 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 CPA3P15088 417 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 GRK2P25098 689 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 KPNA2P52292 529 aaKnown RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 SNRPD1P62314 119 aaKnown RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 BCL2L1Q07817 233 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 STX3Q13277 289 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 FZD5Q13467 585 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 LRRC32Q14392 662 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 PCLAFQ15004 111 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 LACTB2Q53H82 288 aaPredicted RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 PLD6Q8N2A8 252 aaKnown RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 SYNPOQ8N3V7 929 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 GBP7Q8N8V2 638 aaPredicted RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 GPATCH11Q8N954 259 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 OR2AP1Q8NGE2 309 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 SREK1Q8WXA9 508 aaKnown RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 TUBGCP5Q96RT8 1024 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 TCF12Q99081 682 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 NMRAL1Q9HBL8 299 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 INTS10Q9NVR2 710 aaKnown RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 CACNA2D2Q9NY47 1150 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms