RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PPM1JQ5JR12 505 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 TSTD2Q5T7W7 516 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 HHATQ5VTY9 493 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 PDPK2PQ6A1A2 396 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 TRIM68Q6AZZ1 485 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 ZNF470Q6ECI4 717 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 FSTL4Q6MZW2 842 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 RETSATQ6NUM9 610 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 ELMSAN1Q6PJG2 1045 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 NDUFAF2Q8N183 169 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 FAM13CQ8NE31 585 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 LPCAT1Q8NF37 534 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 OR6P1Q8NGX9 317 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 EZH1Q92800 747 aaPredicted RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 PTPRN2Q92932 1015 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 UTP4Q969X6 686 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 ALKBH8Q96BT7 664 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 PPP1R14BQ96C90 147 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 RSPRY1Q96DX4 576 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 MTBPQ96DY7 904 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 FAM111AQ96PZ2 611 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 NUDCD1Q96RS6 583 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 TRIB3Q96RU7 358 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 SRPK1Q96SB4 655 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 GDF15Q99988 308 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 TRIM4Q9C037 500 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 SUDS3Q9H7L9 328 aaPredicted RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 CAB39LQ9H9S4 337 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 SSU72Q9NP77 194 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 SPHK2Q9NRA0 654 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 CHCHD3Q9NX63 227 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 GGT7Q9UJ14 662 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 TMCO1Q9UM00 188 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 MTO1Q9Y2Z2 717 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 GMEB1Q9Y692 573 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 MYO9BQ13459 2157 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 MROH6A6NGR9 719 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 OR51F1A6NGY5 319 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 LDB2O43679 373 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 AHSGP02765 367 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 FGF1P05230 155 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 IMPDH2P12268 514 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 PAMP19021 973 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 HLA-DPA1P20036 260 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 CNTFP26441 200 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 GABRB3P28472 473 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 PTPN4P29074 926 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 SPRP35270 261 aaPredicted RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 SOX11P35716 441 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 PTDSS1P48651 473 aaKnown RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 NEK3P51956 506 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 RPL26P61254 145 aaKnown RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 SNRPNP63162 240 aaKnown RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 IRX4P78413 519 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 MPP1Q00013 466 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 TRAF2Q12933 501 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 KCNC3Q14003 757 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 DLG2Q15700 870 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 TBC1D25Q3MII6 688 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 FUT11Q495W5 492 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 PITRM1Q5JRX3 1037 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 FAM78AQ5JUQ0 283 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 DGKKQ5KSL6 1271 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 GRTP1Q5TC63 336 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 FAM91A1Q658Y4 838 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 NEPROQ6NW34 567 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 ZNF449Q6P9G9 518 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 NCEH1Q6PIU2 408 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 PTAR1Q7Z6K3 402 aaPredicted RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 CMC1Q7Z7K0 106 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 LDB1Q86U70 411 aaPredicted RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 CAMK1DQ8IU85 385 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 RBM12BQ8IXT5 1001 aaKnown RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 RYBPQ8N488 228 aaPredicted RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 DCLK2Q8N568 766 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 OR13J1Q8NGT2 312 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 MIPOL1Q8TD10 442 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 FGF13Q92913 245 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 HDAC10Q969S8 669 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 APOPT1Q96IL0 206 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 ZFYVE19Q96K21 471 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 LMLNQ96KR4 655 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 RBBP8Q99708 897 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 TDRD1Q9BXT4 1180 aaKnown RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 PITPNM3Q9BZ71 974 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 RUBCNLQ9H714 662 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 MRM3Q9HC36 420 aaKnown RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.95□□□□□ -1.34e-10■■■■■ 44.8
RTN4-205ENST00000394609 CIDEBQ9UHD4 219 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 EVLQ9UI08 416 aaPredicted RBP6.95□□□□□ -1.3
RTN4-205ENST00000394609 DOLKQ9UPQ8 538 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 STK38LQ9Y2H1 464 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 SPO11Q9Y5K1 396 aa6.95□□□□□ -1.3
RTN4-205ENST00000394609 ANKRD66B4E2M5 251 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TM9SF1O15321 606 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 ZNF821O75541 412 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 PIGNO95427 931 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 PIM1P11309 404 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 TAC1P20366 129 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TYK2P29597 1187 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms