RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 HSPA1AP0DMV8 641 aaKnown RBP15.54■□□□□ 0.08
PTBP1-204ENST00000394601 HSPA1BP0DMV9 641 aaKnown RBP15.54■□□□□ 0.08
PTBP1-204ENST00000394601 KCNC1P48547 511 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 POU4F1Q01851 419 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 SLC10A7Q0GE19 358 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 TRAF7Q6Q0C0 670 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 TICAM1Q8IUC6 712 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 AHI1Q8N157 1196 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 CCNYL1Q8N7R7 359 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 CAPSLQ8WWF8 208 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 BCAP29Q9UHQ4 241 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 PRPF19Q9UMS4 504 aaKnown RBP15.54■□□□□ 0.08
PTBP1-204ENST00000394601 SCML2Q9UQR0 700 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 TLR6Q9Y2C9 796 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 CORINQ9Y5Q5 1042 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 GBF1Q92538 1859 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 THSD7BQ9C0I4 1608 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 TTC24A2A3L6 582 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 C9JVG2 144 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 HMOX2P30519 316 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 ADSLP30566 484 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 CD151P48509 253 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 DSC1Q08554 894 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 MAPRE1Q15691 268 aaKnown RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 FAM26DQ5JW98 314 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 SDHAF4Q5VUM1 108 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 RPS27LQ71UM5 84 aaKnown RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 GALNT7Q86SF2 657 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 IFNEQ86WN2 208 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 KYQ8NBH2 561 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 BPIFB6Q8NFQ5 453 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 MYEOVQ96EZ4 313 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 HMCESQ96FZ2 354 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 UROC1Q96N76 676 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 SLC39A3Q9BRY0 314 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 CXorf21Q9HAI6 301 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 GPC6Q9Y625 555 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 TLL2Q9Y6L7 1015 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 A0A087X1B8 175 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 UBFD1O14562 309 aaKnown RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 ACOT8O14734 319 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 TADA2AO75478 443 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 ATXN1LP0C7T5 689 aaKnown RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 CPB1P15086 417 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 GRIK1P39086 918 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 HUNKP57058 714 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 LSM3P62310 102 aaKnown RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 BFSP2Q13515 415 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 MS4A13Q5J8X5 152 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 THOC7Q6I9Y2 204 aaKnown RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 TIGD7Q6NT04 549 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-204ENST00000394601 NEPROQ6NW34 567 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 DCDC5Q6ZRR9 648 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 KLHDC9Q8NEP7 349 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 ARRDC2Q8TBH0 407 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 SPPL2BQ8TCT7 592 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 ELMO2Q96JJ3 720 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 SCYL1Q96KG9 808 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 WDR41Q9HAD4 459 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 FNIP2Q9P278 1114 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 PCDHB8Q9UN66 801 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 GABRQQ9UN88 632 aa15.53■□□□□ 0.08
PTBP1-204ENST00000394601 ZNF839A8K0R7 811 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 OAZ2O95190 189 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 H6PDO95479 791 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 ARSDP51689 593 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 AARS2Q5JTZ9 985 aaKnown RBP15.52■□□□□ 0.08
PTBP1-204ENST00000394601 KIAA0408Q6ZU52 694 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 LINC01599Q8WXQ3 324 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 TRIM8Q9BZR9 551 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 TMEM248Q9NWD8 314 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 CDYLQ9Y232 598 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 FAM92AA1XBS5 289 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 SLCO1B7G3V0H7 640 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 TNPO2O14787 897 aaKnown RBP15.52■□□□□ 0.08
PTBP1-204ENST00000394601 ASGR1P07306 291 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 HNRNPLP14866 589 aaKnown RBP eCLIP15.52■□□□□ 0.08
PTBP1-204ENST00000394601 CDK9P50750 372 aaKnown RBP15.52■□□□□ 0.08
PTBP1-204ENST00000394601 MAXP61244 160 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 PTK2BQ14289 1009 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 RFTN1Q14699 578 aaPredicted RBP15.52■□□□□ 0.08
PTBP1-204ENST00000394601 SLC39A12Q504Y0 691 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 CILP2Q8IUL8 1156 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 SPATA2LQ8IUW3 424 aaPredicted RBP15.52■□□□□ 0.08
PTBP1-204ENST00000394601 LRRC49Q8IUZ0 686 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 TAMM41Q96BW9 452 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 POMKQ9H5K3 350 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 ZFYVE28Q9HCC9 887 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
PTBP1-204ENST00000394601 C6orf203Q9P0P8 240 aaPredicted RBP15.52■□□□□ 0.08
PTBP1-204ENST00000394601 RIMS3Q9UJD0 308 aa15.52■□□□□ 0.08
PTBP1-204ENST00000394601 A8MT66 165 aa15.52■□□□□ 0.07
PTBP1-204ENST00000394601 DENRO43583 198 aaKnown RBP15.52■□□□□ 0.07
PTBP1-204ENST00000394601 MOCS2O96007 188 aaPredicted RBP15.52■□□□□ 0.07
PTBP1-204ENST00000394601 EEF1DP29692 281 aaKnown RBP15.52■□□□□ 0.07
PTBP1-204ENST00000394601 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.07
PTBP1-204ENST00000394601 CDKN2DP55273 166 aa15.52■□□□□ 0.07
PTBP1-204ENST00000394601 CRHR2Q13324 411 aa15.52■□□□□ 0.07
PTBP1-204ENST00000394601 PDCD4Q53EL6 469 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms