RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 NAB1Q13506 487 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 CRY1Q16526 586 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 EOGTQ5NDL2 527 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 Q6ZVL8 140 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 CPNE1Q99829 537 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 FBXO6Q9NRD1 293 aaPredicted RBP23.21■■□□□ 1.31
CNN3-202ENST00000394202 SCN8AQ9UQD0 1980 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 A0A1W2PPM1 405 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 HAUS5O94927 633 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 ZNF30P17039 623 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 ETV3P41162 512 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 SPINT3P49223 89 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 LIG3P49916 1009 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 HSP90B2PQ58FF3 399 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 MROH9Q5TGP6 573 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 PSAPL1Q6NUJ1 521 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 RIBC1Q8N443 379 aaPredicted RBP23.21■■□□□ 1.31
CNN3-202ENST00000394202 OTUD6BQ8N6M0 293 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 ACVR1CQ8NER5 493 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 MRGPRX1Q96LB2 322 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 FAM167BQ9BTA0 163 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 CD93Q9NPY3 652 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 CATSPERZQ9NTU4 200 aa23.21■■□□□ 1.31
CNN3-202ENST00000394202 RNASEH2AO75792 299 aaKnown RBP23.2■■□□□ 1.3
CNN3-202ENST00000394202 CREB1P16220 341 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 GP5P40197 560 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 AFTPHQ6ULP2 937 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 CROCCP2Q86T23 111 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 UBALD2Q8IYN6 164 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 TLCD1Q96CP7 247 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 SHDQ96IW2 340 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 COQ6Q9Y2Z9 468 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 FADS3Q9Y5Q0 445 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 S1PR4O95977 384 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 UGT1A6P19224 532 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 UGT1A1P22309 533 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 UGT1A4P22310 534 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 UGT1A3P35503 534 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 UGT1A5P35504 534 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 MAGOHP61326 146 aaKnown RBP23.2■■□□□ 1.3
CNN3-202ENST00000394202 GPS2Q13227 327 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 HSF5Q4G112 596 aaPredicted RBP23.2■■□□□ 1.3
CNN3-202ENST00000394202 ZRANB3Q5FWF4 1079 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 AGBL2Q5U5Z8 902 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 CNSTQ6PJW8 725 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 GPR150Q8NGU9 434 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 SCAMP4Q969E2 229 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 RBBP8Q99708 897 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 FBXL12Q9NXK8 326 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 TXNDC16Q9P2K2 825 aa23.2■■□□□ 1.3
CNN3-202ENST00000394202 MRPS17Q9Y2R5 130 aaKnown RBP23.2■■□□□ 1.3
CNN3-202ENST00000394202 TCRBV21S2A2A0A5A6 115 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 TRIM49D1C9J1S8 452 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 MMP20O60882 483 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 SRP72O76094 671 aaKnown RBP23.19■■□□□ 1.3
CNN3-202ENST00000394202 ELFN1P0C7U0 828 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 NDUFV2P19404 249 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 PPARDQ03181 441 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 CHRNA6Q15825 494 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 TRIM67Q6ZTA4 783 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 EXOC3L1Q86VI1 746 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 ZC3HC1Q86WB0 502 aaKnown RBP23.19■■□□□ 1.3
CNN3-202ENST00000394202 CALML6Q8TD86 181 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 SIPA1Q96FS4 1042 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 SGSM3Q96HU1 749 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 TBC1D17Q9HA65 648 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 MTO1Q9Y2Z2 717 aaKnown RBP23.19■■□□□ 1.3
CNN3-202ENST00000394202 NUMA1Q14980 2115 aa23.19■■□□□ 1.3
CNN3-202ENST00000394202 NEMP1O14524 444 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 PRAMEF1O95521 474 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 ITGA2BP08514 1039 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 KRT15P19012 456 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 PGGT1BP53609 377 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 ELP6Q0PNE2 266 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 FASTKD1Q53R41 847 aaKnown RBP23.18■■□□□ 1.3
CNN3-202ENST00000394202 GRTP1Q5TC63 336 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 TECPR1Q7Z6L1 1165 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 OMDQ99983 421 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 FBRSQ9HAH7 460 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 GLYATL1P3A0A0U1RQE8 302 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 DNTTP04053 509 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 GABRG2P18507 467 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 NFKBIAP25963 317 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 SPAM1P38567 509 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 TRABD2AQ86V40 505 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 SPNS2Q8IVW8 549 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 SRRM1Q8IYB3 904 aaKnown RBP23.18■■□□□ 1.3
CNN3-202ENST00000394202 GANCQ8TET4 914 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 CCDC97Q96F63 343 aaPredicted RBP23.18■■□□□ 1.3
CNN3-202ENST00000394202 SERAC1Q96JX3 654 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 KLF6Q99612 283 aaPredicted RBP23.18■■□□□ 1.3
CNN3-202ENST00000394202 C19orf43Q9BQ61 176 aa23.18■■□□□ 1.3
CNN3-202ENST00000394202 SNRPAP09012 282 aaKnown RBP23.17■■□□□ 1.3
CNN3-202ENST00000394202 OAS2P29728 719 aaKnown RBP23.17■■□□□ 1.3
CNN3-202ENST00000394202 LEPRP48357 1165 aaKnown RBP23.17■■□□□ 1.3
CNN3-202ENST00000394202 SUOXP51687 545 aa23.17■■□□□ 1.3
CNN3-202ENST00000394202 LIMK2P53671 638 aa23.17■■□□□ 1.3
CNN3-202ENST00000394202 ACOX1Q15067 660 aa23.17■■□□□ 1.3
CNN3-202ENST00000394202 TMEM52BQ4KMG9 183 aa23.17■■□□□ 1.3
CNN3-202ENST00000394202 MRNIPQ6NTE8 343 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms