RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KLHL2O95198 593 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 APOA4P06727 396 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 MYL2P10916 166 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 HLA-EP13747 358 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 GJA4P35212 333 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 OVGP1Q12889 678 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 ILF2Q12905 390 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 STX3Q13277 289 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CSHL1Q14406 222 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 GRIN2CQ14957 1233 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 PCLAFQ15004 111 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CDKN3Q16667 212 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 GLIPR1L2Q4G1C9 344 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 RNF187Q5TA31 235 aaPredicted RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 LRRC66Q68CR7 880 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 ZNF549Q6P9A3 640 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 BRAT1Q6PJG6 821 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 SPNS2Q8IVW8 549 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 SFTPA1Q8IWL2 248 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 PIANPQ8IYJ0 282 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CENPLQ8N0S6 344 aaPredicted RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 HEXDCQ8WVB3 486 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 UCMAQ8WVF2 138 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 SREK1Q8WXA9 508 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 VOPP1Q96AW1 172 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 RPP25Q9BUL9 199 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 TRMT61BQ9BVS5 477 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 C1QTNF1Q9BXJ1 281 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 ASB8Q9H765 288 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 SIRPGQ9P1W8 387 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 COPG2Q9UBF2 871 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CORO1CQ9ULV4 474 aaPredicted RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 USP15Q9Y4E8 981 aaPredicted RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 MTCH2Q9Y6C9 303 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 GLYATL1P3A0A0U1RQE8 302 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 GPR39O43194 453 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 OR1I1O60431 355 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 PRAMEF1O95521 474 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CTSLP07711 333 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CCDC166P0CW27 439 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CYP2A6P11509 494 aaPredicted RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 BPIP17213 487 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 LTBRP36941 435 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 SPAM1P38567 509 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CSRP3P50461 194 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 VASPP50552 380 aaPredicted RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 KPNA2P52292 529 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 HNRNPH2P55795 449 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 XIAPP98170 497 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 BST1Q10588 318 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 DLG1Q12959 904 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 IFT88Q13099 833 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 PDAP1Q13442 181 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 ARHGEF7Q14155 803 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 EIF4HQ15056 248 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 FAM83EQ2M2I3 478 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CTC1Q2NKJ3 1217 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 TSNAXIP1Q2TAA8 658 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 ITPRIPL2Q3MIP1 535 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 AGAP9Q5VTM2 703 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 LRRC8EQ6NSJ5 796 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 CGB2Q6NT52 195 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 SERPINA13PQ6UXR4 307 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 TTC7BQ86TV6 843 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 PIM3Q86V86 326 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 LCA5Q86VQ0 697 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 STK40Q8N2I9 435 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 TERB1Q8NA31 727 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 LPGAT1Q92604 370 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 ERLEC1Q96DZ1 483 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 LYSMD1Q96S90 227 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 TTC1Q99614 292 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 AARSD1Q9BTE6 412 aaKnown RBP8.61□□□□□ -1.03
TDP1-203ENST00000393454 OSBPL1AQ9BXW6 950 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 NPHS2Q9NP85 383 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 B4GALT6Q9UBX8 382 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 MID2Q9UJV3 735 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 APPL1Q9UKG1 709 aa8.61□□□□□ -1.03
TDP1-203ENST00000393454 EDDM13A0A1B0GTR0 161 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 TK2O00142 265 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 KPNA3O00505 521 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 KLF11O14901 512 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 LTA4HP09960 611 aaKnown RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 TROVE2P10155 538 aaKnown RBP eCLIP8.6□□□□□ -1.03
TDP1-203ENST00000393454 CHRM1P11229 460 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 RALBP11234 206 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 UGT1A6P19224 532 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ITGALP20701 1170 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 UGT1A1P22309 533 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 UGT1A4P22310 534 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 FDXRP22570 491 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 NFKBIAP25963 317 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 UGT1A3P35503 534 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 UGT1A5P35504 534 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 PPARGP37231 505 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 OPRD1P41143 372 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 PTSQ03393 145 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms