RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SLC5A11Q8WWX8 675 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 TOP1MTQ969P6 601 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 HDAC10Q969S8 669 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 RIPOR3Q96MK2 946 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 ZBTB18Q99592 522 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 TTYH1Q9H313 450 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 DPEP3Q9H4B8 488 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 RANGRFQ9HD47 186 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 PAK1IP1Q9NWT1 392 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 C3orf18Q9UK00 162 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 MAN2B2Q9Y2E5 1009 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 HMX3A6NHT5 357 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 SLC37A4O43826 429 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 IL1BP01584 269 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 ERBB2P04626 1255 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 IVDP26440 423 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 BMPR1AP36894 532 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 PSMC6P62333 389 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 FAM98BQ52LJ0 330 aaKnown RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 STEAP3Q658P3 488 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF57Q68EA5 555 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 LRRC8DQ7L1W4 858 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 ZBTB44Q8NCP5 570 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 MAGEB10Q96LZ2 347 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 MUS81Q96NY9 551 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 FAM83DQ9H4H8 585 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 SIRPGQ9P1W8 387 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 AFDNP55196 1824 aaKnown RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 LRRC37A3O60309 1634 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 TRPM3Q9HCF6 1732 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 F5H423 210 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 WWP2O00308 870 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 KPNA5O15131 536 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 KDM4BO94953 1096 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 ANGPTL1O95841 491 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 RAB3AP20336 220 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 SNX16P57768 344 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 CDC20Q12834 499 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 Q3ZCU0 254 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 AKIRIN2Q53H80 203 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 FAM209BQ5JX69 171 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 DGKKQ5KSL6 1271 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 CNSTQ6PJW8 725 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 ZYG11AQ6WRX3 759 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 CHMP1BQ7LBR1 199 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 KATNAL2Q8IYT4 538 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 ZDHHC14Q8IZN3 488 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 XXYLT1Q8NBI6 393 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF431Q8TF32 576 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 PTERQ96BW5 349 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 TEKT5Q96M29 485 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 FEM1AQ9BSK4 669 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 SPON1Q9HCB6 807 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 NECTIN3Q9NQS3 549 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 HPF1Q9NWY4 346 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 KDM3BQ7LBC6 1761 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 MYH3P11055 1940 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 TPP1O14773 563 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 PLOD3O60568 738 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CSF2P04141 144 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 RPL22P35268 128 aaKnown RBP7.61□□□□□ -1.19
VTI1A-201ENST00000393077 JAM2P57087 298 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 ERVK-21P61565 698 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 PIGFQ07326 219 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 SMTNL2Q2TAL5 461 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 TIMM50Q3ZCQ8 353 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 PYDC2Q56P42 97 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 PIGGQ5H8A4 983 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 PPP1R18Q6NYC8 613 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 LYPD8Q6UX82 237 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 TMPRSS11AQ6ZMR5 421 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 LACC1Q8IV20 430 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 LYSMD2Q8IV50 215 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 METTL4Q8N3J2 472 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CARNMT1Q8N4J0 409 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 FEZF2Q8TBJ5 459 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 URGCPQ8TCY9 931 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 LGALS12Q96DT0 336 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF556Q9HAH1 456 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 EML4Q9HC35 981 aaKnown RBP7.61□□□□□ -1.19
VTI1A-201ENST00000393077 RNF146Q9NTX7 359 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 TBC1D22BQ9NU19 505 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 B3GNT2Q9NY97 397 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 GGA3Q9NZ52 723 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 FEM1BQ9UK73 627 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 HRH3Q9Y5N1 445 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 MYO1GB0I1T2 1018 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 MTA2O94776 668 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 FCER2P06734 321 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 TSPAN19P0C672 248 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 NCAM1P13591 858 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 MAPKAPK2P49137 400 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 NCS1P62166 190 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 NFYCQ13952 458 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 SLC9B1Q4ZJI4 515 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 SPESP1Q6UW49 350 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 FAM131AQ6UXB0 335 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 TNS4Q8IZW8 715 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF781Q8N8C0 355 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 AKT1S1Q96B36 256 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms