RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 MAPK10P53779 464 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 TFAMQ00059 246 aaKnown RBP16.3■□□□□ 0.2
TRA2A-202ENST00000392502 SNTA1Q13424 505 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 IER5Q5VY09 327 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 TXNRD3NBQ6F5E7 133 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 PNCKQ6P2M8 343 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 SPATC1Q76KD6 591 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 WDTC1Q8N5D0 677 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 NCLNQ969V3 563 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 SLITRK1Q96PX8 696 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 MMP27Q9H306 513 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 PDGFCQ9NRA1 345 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 CISHQ9NSE2 258 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 RBPJLQ9UBG7 517 aa16.3■□□□□ 0.2
TRA2A-202ENST00000392502 CPSF3Q9UKF6 684 aaKnown RBP16.3■□□□□ 0.2
TRA2A-202ENST00000392502 HMX3A6NHT5 357 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 AQP12BA6NM10 295 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 CTDSP2O14595 271 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 OGTO15294 1046 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 IFNB1P01574 187 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 C1QAP02745 245 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 HOXC6P09630 235 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 IL7P13232 177 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 IL10P22301 178 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 C1QBPQ07021 282 aaKnown RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 TOR2AQ5JU69 321 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 CELF3Q5SZQ8 465 aaKnown RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 C9orf131Q5VYM1 1079 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 STEAP3Q658P3 488 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 METTL3Q86U44 580 aaKnown RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 AQP12AQ8IXF9 295 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 DTX3Q8N9I9 347 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 OR2T34Q8NGX1 318 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 OR2T3Q8NH03 318 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ZSCAN18Q8TBC5 510 aaPredicted RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 GTF2H4Q92759 462 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 DACT3Q96B18 629 aaPredicted RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 MCRS1Q96EZ8 462 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ASIC4Q96FT7 647 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 RNF170Q96K19 258 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 MINDY3Q9H8M7 445 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 IARS2Q9NSE4 1012 aaKnown RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ADA2Q9NZK5 511 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 LEUTXA8MZ59 168 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 F8VP50 259 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 SLCO1B7G3V0H7 640 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 TRIM24O15164 1050 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ACSL4O60488 711 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 SLC4A1P02730 911 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 KRT7P08729 469 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 CYP2A7P20853 494 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 EVI2BP34910 448 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 MSX2P35548 267 aaPredicted RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 TRIM23P36406 574 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 HAAOP46952 286 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 CLCN3P51790 818 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 EFNA5P52803 228 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 PSME3P61289 254 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ADARB1P78563 741 aaKnown RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 SAMD4BQ5PRF9 694 aaKnown RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ANKRD22Q5VYY1 191 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 CREB3L2Q70SY1 520 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ADGRF2Q8IZF7 708 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 TMEM35BQ8NCS4 154 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 DYNC2LI1Q8TCX1 351 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 LPGAT1Q92604 370 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 HDAC2Q92769 488 aaKnown RBP16.29■□□□□ 0.2
TRA2A-202ENST00000392502 LRRC39Q96DD0 335 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 VCPIP1Q96JH7 1222 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 SPATA33Q96N06 139 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 MCEEQ96PE7 176 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ZNF385DQ9H6B1 395 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ERVMER34-1Q9H9K5 563 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 HPS4Q9NQG7 708 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 AGPAT4Q9NRZ5 378 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 GLTPQ9NZD2 209 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 ACTR3BQ9P1U1 418 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 TJP2Q9UDY2 1190 aa16.29■□□□□ 0.2
TRA2A-202ENST00000392502 IGKV6-21A0A0C4DH24 114 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 TCRBV5S1A1TA0A578 114 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 E7ENX8 843 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 PLIN3O60664 434 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 ZNF780AO75290 641 aaPredicted RBP16.28■□□□□ 0.2
TRA2A-202ENST00000392502 USP12O75317 370 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 TOP3BO95985 862 aaKnown RBP16.28■□□□□ 0.2
TRA2A-202ENST00000392502 IQCF3P0C7M6 154 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 WEE1P30291 646 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 DPP6P42658 865 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 MAGEA11P43364 429 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 POLR2GP62487 172 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRA2A-202ENST00000392502 INCA1Q0VD86 236 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 STX5Q13190 355 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 ORC1Q13415 861 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 INPP5AQ14642 412 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 DDR2Q16832 855 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 CYBRD1Q53TN4 286 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 VWA5B1Q5TIE3 1220 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 SULF1Q8IWU6 871 aa16.28■□□□□ 0.2
TRA2A-202ENST00000392502 ZFAND1Q8TCF1 268 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms