RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 LRRC3Q9BY71 257 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 TAS2R13Q9NYV9 303 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 SDHDO14521 159 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 KIAA0355O15063 1070 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 SMIM24O75264 130 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 PRAMEF12O95522 483 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 LINC00271P0C7V0 271 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 CTPS1P17812 591 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 ITGAXP20702 1163 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 GTF2A1P52655 376 aaPredicted RBP18.48■□□□□ 0.55
STRADB-202ENST00000392249 PTPRNQ16849 979 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 SETMARQ53H47 684 aaPredicted RBP18.48■□□□□ 0.55
STRADB-202ENST00000392249 ZNF678Q5SXM1 525 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 C1orf146Q5VVC0 180 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 KLHL23Q8NBE8 558 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 TCF12Q99081 682 aa18.48■□□□□ 0.55
STRADB-202ENST00000392249 C2orf49Q9BVC5 232 aaPredicted RBP18.48■□□□□ 0.55
STRADB-202ENST00000392249 SMG9Q9H0W8 520 aaKnown RBP18.48■□□□□ 0.55
STRADB-202ENST00000392249 UBXN8O00124 270 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 GPR39O43194 453 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 FZD6O60353 706 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 OR1I1O60431 355 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 BAIAP3O94812 1187 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 CXCL14O95715 111 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 BMP1P13497 986 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 PTDSS1P48651 473 aaKnown RBP18.47■□□□□ 0.55
STRADB-202ENST00000392249 SLC7A9P82251 487 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 BTKQ06187 659 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 TRMT5Q32P41 509 aaKnown RBP18.47■□□□□ 0.55
STRADB-202ENST00000392249 EML3Q32P44 896 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 C6orf163Q5TEZ5 329 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 HTR3DQ70Z44 454 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 SNX32Q86XE0 403 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 CAMK1DQ8IU85 385 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 GPR65Q8IYL9 337 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 DEFB107AQ8IZN7 70 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 FIBCD1Q8N539 461 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 PTGR2Q8N8N7 351 aaPredicted RBP18.47■□□□□ 0.55
STRADB-202ENST00000392249 CFAP61Q8NHU2 1237 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 DTX3LQ8TDB6 740 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 STON2Q8WXE9 905 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 L3HYPDHQ96EM0 354 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 MAELQ96JY0 434 aaKnown RBP18.47■□□□□ 0.55
STRADB-202ENST00000392249 BIRC8Q96P09 236 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 GPR21Q99679 349 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 ZNF385DQ9H6B1 395 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 ARHGAP26Q9UNA1 814 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 UBFD1O14562 309 aaKnown RBP18.47■□□□□ 0.55
STRADB-202ENST00000392249 ALPIP09923 528 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 NFKB2Q00653 900 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 CCDC6Q16204 474 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 RETSATQ6NUM9 610 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 KREMEN2Q8NCW0 462 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 MYO19Q96H55 970 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 CORO1BQ9BR76 489 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 GALPQ9UBC7 116 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 ZNF711Q9Y462 761 aa18.47■□□□□ 0.55
STRADB-202ENST00000392249 TRAV19A0A0A6YYK7 116 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 PDE5AO76074 875 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 SIX3O95343 332 aaPredicted RBP18.46■□□□□ 0.55
STRADB-202ENST00000392249 RPSAP08865 295 aaKnown RBP18.46■□□□□ 0.55
STRADB-202ENST00000392249 ARSAP15289 507 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 TTPAP49638 278 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 C1QTNF8P60827 252 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 AP1S1P61966 158 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 HERVK_113P63132 956 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 LMAN2Q12907 356 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 PFKFB4Q16877 469 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 UNC50Q53HI1 259 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 LILRA6Q6PI73 481 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 LYSMD3Q7Z3D4 306 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 CPSF7Q8N684 471 aaKnown RBP18.46■□□□□ 0.55
STRADB-202ENST00000392249 SLC22A17Q8WUG5 538 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 RTKNQ9BST9 563 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 ERVK-6Q9BXR3 956 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 SYTL2Q9HCH5 934 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 HACD3Q9P035 362 aa18.46■□□□□ 0.55
STRADB-202ENST00000392249 EVLQ9UI08 416 aaPredicted RBP18.46■□□□□ 0.55
STRADB-202ENST00000392249 RGSL1A5PLK6 1076 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 CCL16O15467 120 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 SORBS2O94875 1100 aaKnown RBP18.45■□□□□ 0.54
STRADB-202ENST00000392249 ADH1AP07327 375 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 THRAP10827 490 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 MTHFD2P13995 350 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 GKP32189 559 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 CDH13P55290 713 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 ACTR3P61158 418 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 GALNT1Q10472 559 aaPredicted RBP18.45■□□□□ 0.54
STRADB-202ENST00000392249 ARMC12Q5T9G4 340 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 CLEC6AQ6EIG7 209 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 CCDC149Q6ZUS6 474 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 AFAP1L2Q8N4X5 818 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 CEP70Q8NHQ1 597 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 RHEBL1Q8TAI7 183 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 ACTRT2Q8TDY3 377 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 EID2BQ96D98 161 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 FAR2Q96K12 515 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 ATOH8Q96SQ7 321 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 SLC30A3Q99726 388 aa18.45■□□□□ 0.54
STRADB-202ENST00000392249 TRMOQ9BU70 441 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms