RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TFECO14948 347 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 OGTO15294 1046 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 EIF3DO15371 548 aaKnown RBP eCLIP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 KLF4O43474 513 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 KCNQ2O43526 872 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CA12O43570 354 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM189A1O60320 539 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ZIC3O60481 467 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CTSVO60911 334 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 DTNBO60941 627 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 RAB11FIP3O75154 756 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 RTN2O75298 545 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PDE9AO76083 593 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 RECQL5O94762 991 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CNTN5O94779 1100 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 LETM1O95202 739 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 LARGE1O95461 756 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CLDN7O95471 211 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PRAMEF12O95522 483 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 POP4O95707 220 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 KRT14P02533 472 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 LPLP06858 475 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 GRPP07492 148 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CISD3P0C7P0 127 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 RFPL3SP0C7P2 107 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 DHRS4L1P0CG22 281 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 LYNX1P0DP58 116 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 UMPSP11172 480 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 TOP1P11387 765 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CKMT1AP12532 417 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 UNGP13051 313 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 GYS1P13807 737 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 LIFP15018 202 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CPN1P15169 458 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF23P17027 643 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF8P17098 575 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 EGR1P18146 543 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ANXA7P20073 488 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CSRP1P21291 193 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 TGM2P21980 687 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PRKACGP22612 351 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 COL5A3P25940 1745 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 SMARCA1P28370 1054 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 RBL1P28749 1068 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 UQCRC1P31930 480 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 HNRNPH1P31943 449 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 LSP1P33241 339 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 G6PCP35575 357 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ELK3P41970 407 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 STAT6P42226 847 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 DPP6P42658 865 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 MT4P47944 62 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 UQCRFS1P47985 274 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CTCFP49711 727 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 KHKP50053 298 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 MEOX2P50222 304 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CLCN4P51793 760 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 AGFG1P52594 562 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 HNRNPH2P55795 449 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 STX17P56962 302 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 SEC61BP60468 96 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CACNG7P62955 275 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 NTHL1P78549 312 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 MRPS9P82933 396 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CDK17Q00537 523 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ANK2Q01484 3957 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 SP3Q02447 781 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 MAP2K1Q02750 393 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CHAF1AQ13111 956 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 TARDBPQ13148 414 aaKnown RBP eCLIP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 SEMA3BQ13214 749 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 DNASE1L3Q13609 305 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 SNTB1Q13884 538 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PDE7AQ13946 482 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 DOC2AQ14183 400 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF234Q14588 700 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 MTF1Q14872 753 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CLCA4Q14CN2 919 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 IRF4Q15306 451 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 SMAD1Q15797 465 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 IL17AQ16552 155 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 FSCN1Q16658 493 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 UGT8Q16880 541 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 MTHFSDQ2M296 383 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ANO4Q32M45 955 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 TIMM50Q3ZCQ8 353 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 AMOTQ4VCS5 1084 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 C5orf47Q569G3 176 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PPP6R3Q5H9R7 873 aaPredicted RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 LY6G6FQ5SQ64 297 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 C9orf129Q5T035 196 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 RAET1LQ5VY80 246 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 NCAPH2Q6IBW4 605 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 JADE1Q6IE81 842 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 HCP5Q6MZN7 132 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ERAP2Q6P179 960 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PGBD2Q6P3X8 592 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM171BQ6P995 826 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 CTR9Q6PD62 1173 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 AAGABQ6PD74 315 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms