RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FAF1Q9UNN5 650 aaPredicted RBP3.22□□□□□ -1.89
TRAV40-201ENST00000390467 LOXL2Q9Y4K0 774 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 TNPO2O14787 897 aaKnown RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 SEC14L5O43304 696 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 SEC31AO94979 1220 aaKnown RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 ZNF883P0CG24 379 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 COX7A2P14406 83 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 DDX5P17844 614 aaKnown RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 RRM1P23921 792 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 PDE1BQ01064 536 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 RUNX1T1Q06455 604 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 CCDC6Q16204 474 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 COL28A1Q2UY09 1125 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 SIRPB2Q5JXA9 342 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 GGNBP1Q5YKI7 109 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 METTL2BQ6P1Q9 378 aaKnown RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 RRM2BQ7LG56 351 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 METTL27Q8N6F8 245 aaPredicted RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 KLHDC9Q8NEP7 349 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 ACVR1CQ8NER5 493 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 OR5R1Q8NH85 324 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 FAM76AQ8TAV0 307 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 TAS1R2Q8TE23 839 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 SLC38A5Q8WUX1 472 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 ZNF524Q96C55 264 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 KLHL29Q96CT2 875 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 METTL2AQ96IZ6 378 aaKnown RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 LITAFQ99732 161 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 HERPUD2Q9BSE4 406 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 LRRC1Q9BTT6 524 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 POLR3CQ9BUI4 534 aaPredicted RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 PPCSQ9HAB8 311 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 TTC7AQ9ULT0 858 aaPredicted RBP3.21□□□□□ -1.9
TRAV40-201ENST00000390467 ERVK-11Q9UQG0 969 aa3.21□□□□□ -1.9
TRAV40-201ENST00000390467 A0A1W2PQM1 296 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 CTAGE9A4FU28 777 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 VCYO14598 125 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 DVL1O14640 695 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 WDR1O75083 606 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 PEX14O75381 377 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 EGFP01133 1207 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 CTAGE8P0CG41 777 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 IRF1P10914 325 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 VEGFCP49767 419 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 DVL1P1P54792 670 aaPredicted RBP3.2□□□□□ -1.9
TRAV40-201ENST00000390467 ERVK11-1P61568 191 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 GTF2H2Q13888 395 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 ZNF234Q14588 700 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 GTF2H2CQ6P1K8 395 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 ARHGAP11AQ6P4F7 1023 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 CTAGE4Q8IX94 777 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 BEST3Q8N1M1 668 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 GRAPLQ8TC17 118 aaPredicted RBP3.2□□□□□ -1.9
TRAV40-201ENST00000390467 PIGTQ969N2 578 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 GCC1Q96CN9 775 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 ORAI1Q96D31 301 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 MAELQ96JY0 434 aaKnown RBP3.2□□□□□ -1.9
TRAV40-201ENST00000390467 PPP1R13BQ96KQ4 1090 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 UBXN10Q96LJ8 280 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 H2AFJQ9BTM1 129 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 RBM4Q9BWF3 364 aaKnown RBP3.2□□□□□ -1.9
TRAV40-201ENST00000390467 GGA3Q9NZ52 723 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 CEPT1Q9Y6K0 416 aa3.2□□□□□ -1.9
TRAV40-201ENST00000390467 A0A1B0GU03 582 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 PMS2P5A8MQ11 134 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 TBX6O95947 436 aaPredicted RBP3.19□□□□□ -1.9
TRAV40-201ENST00000390467 POLBP06746 335 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 PRSS1P07477 247 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 PATE4P0C8F1 98 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 PAX1P15863 534 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 ALDH4A1P30038 563 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 DCTP40126 519 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 TAS2R38P59533 333 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 CSNK2A1P68400 391 aaPredicted RBP3.19□□□□□ -1.9
TRAV40-201ENST00000390467 FGFBP1Q14512 234 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 PRICKLE4Q2TBC4 344 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 TMEM30BQ3MIR4 351 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 KRT71Q3SY84 523 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 BRAT1Q6PJG6 821 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 SLC46A3Q7Z3Q1 461 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 NRROSQ86YC3 692 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 ANKRD18AQ8IVF6 992 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 ANKRD42Q8N9B4 389 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 CSNK2A3Q8NEV1 391 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 OR10V1Q8NGI7 309 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 OR52I2Q8NH67 350 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 KIF1BPQ96EK5 621 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 F2RL3Q96RI0 385 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 IFIH1Q9BYX4 1025 aaKnown RBP3.19□□□□□ -1.9
TRAV40-201ENST00000390467 EGLN1Q9GZT9 426 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 PTPRCP08575 1304 aa3.19□□□□□ -1.9
TRAV40-201ENST00000390467 ANTXRLA6NF34 631 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 TNFSF14O43557 240 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 IFIT1P09914 478 aaKnown RBP3.18□□□□□ -1.9
TRAV40-201ENST00000390467 CDAP32320 146 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 GABRB2P47870 512 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 GNAQP50148 359 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 RPP30P78346 268 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms