RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 ATP12AP54707 1039 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 UBE3AQ05086 875 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FSCN1Q16658 493 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ELP2Q6IA86 826 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CCDC149Q6ZUS6 474 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 OR4A15Q8NGL6 344 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 METTL2AQ96IZ6 378 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ZSWIM3Q96MP5 696 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PELOQ9BRX2 385 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 BBS2Q9BXC9 721 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CIPCQ9C0C6 399 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 LATS2Q9NRM7 1088 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 RASSF1Q9NS23 344 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 GDAP2Q9NXN4 497 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 KLHL42Q9P2K6 505 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 KLHL21Q9UJP4 597 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 NUDT5Q9UKK9 219 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ZFR2Q9UPR6 939 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SCGNO76038 276 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MAP3K6O95382 1288 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 HMGCRP04035 888 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SNRPB2P08579 225 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CYP11B1P15538 503 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 KCNA5P22460 613 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ATP5F1P24539 256 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TRAF2Q12933 501 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PPIGQ13427 754 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 NFE2Q16621 373 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PLEKHG4Q58EX7 1191 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 HERC6Q8IVU3 1022 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 C10orf82Q8WW14 230 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 QRFPRQ96P65 431 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ANKRA2Q9H9E1 313 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 VPS26AO75436 327 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 KRT36O76013 467 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 IPO13O94829 963 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ATP6V1B1P15313 513 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 OAZ1P54368 228 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PHC1P78364 1004 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 NTRK3Q16288 839 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ZSWIM7Q19AV6 140 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CDNFQ49AH0 187 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ATP6AP1LQ52LC2 224 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ALFQ53S48 1182 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 WDR49Q8IV35 697 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 BANPQ8N9N5 519 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 OR56A4Q8NGH8 313 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 NSUN4Q96CB9 384 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 AHCYL2Q96HN2 611 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 RPRD1AQ96P16 312 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CHST12Q9NRB3 414 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 RGS18Q9NS28 235 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 LRRC4BQ9NT99 713 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF624Q9P2J8 865 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 NHSL1Q5SYE7 1610 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 FOXO6A8MYZ6 492 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PCDH8O95206 1070 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 RASAL1O95294 804 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ICAM1P05362 532 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 BMP2P12643 396 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF24P17028 368 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PSME3P61289 254 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 EIF4HQ15056 248 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 FBXO42Q6P3S6 717 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CASP12Q6UXS9 341 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ZZZ3Q8IYH5 903 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 NKAPQ8N5F7 415 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CCDC185Q8N715 623 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MFSD2AQ8NA29 543 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 KBTBD7Q8WVZ9 684 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 VRTNQ9H8Y1 702 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 TRNAU1APQ9NX07 287 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SAGE1Q9NXZ1 904 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 NINJ2Q9NZG7 142 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 HEY1Q9Y5J3 304 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLC15A5A6NIM6 579 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 H7C2Y5 167 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 DLGAP1O14490 977 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PDCD5O14737 125 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLC9A3R1O14745 358 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 BANF1O75531 89 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MFN2O95140 757 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ETS1P14921 441 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 USP46P62068 366 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PRKCDQ05655 676 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PPATQ06203 517 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PCID2Q5JVF3 399 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF367Q7RTV3 350 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 TIGD4Q8IY51 512 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 GRAMD1CQ8IYS0 662 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SERPINB11Q96P15 392 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 APBA2Q99767 749 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MED28Q9H204 178 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 TMEM260Q9NX78 707 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 HSPBP1Q9NZL4 362 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 C1orf232A0A0U1RR37 186 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PRKD3O94806 890 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 RAB5BP61020 215 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLC14A2Q15849 920 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SNRNP35Q16560 246 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms