RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 AIM2O14862 343 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 MAP3K7O43318 606 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 TBL1XO60907 577 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 SRP72O76094 671 aaKnown RBP12.59□□□□□ -0.39
VPS16-202ENST00000380445 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 TMCC1O94876 653 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 F11P03951 625 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 ANPEPP15144 967 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 TTPAP49638 278 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 NUDT2P50583 147 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 PLK1P53350 603 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 MTTPP55157 894 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 NAA20P61599 178 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 MAPRE2Q15555 327 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 APLFQ8IW19 511 aaPredicted RBP12.59□□□□□ -0.39
VPS16-202ENST00000380445 CARNMT1Q8N4J0 409 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 PNPLA1Q8N8W4 532 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 MDGA1Q8NFP4 955 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 NRG4Q8WWG1 115 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 TMA16Q96EY4 203 aaKnown RBP12.59□□□□□ -0.39
VPS16-202ENST00000380445 LBHD1Q9BQE6 289 aaPredicted RBP12.59□□□□□ -0.39
VPS16-202ENST00000380445 MRPL17Q9NRX2 175 aaKnown RBP12.59□□□□□ -0.39
VPS16-202ENST00000380445 BCAP29Q9UHQ4 241 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 TRAF6Q9Y4K3 522 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 INSL5Q9Y5Q6 135 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 TMEM233B4DJY2 109 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 INHBCP55103 352 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 ATP6V0D1P61421 351 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 CREMQ03060 361 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 RAD51Q06609 339 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 AARS2Q5JTZ9 985 aaKnown RBP12.59□□□□□ -0.39
VPS16-202ENST00000380445 ADGRG6Q86SQ4 1221 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 GPR65Q8IYL9 337 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 RYBPQ8N488 228 aaPredicted RBP12.59□□□□□ -0.39
VPS16-202ENST00000380445 STAG3L4Q8TBR4 150 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 PLEKHG4BQ96PX9 1271 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 TMEM39AQ9NV64 488 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 SMPD4Q9NXE4 827 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 STK39Q9UEW8 545 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 VPS28Q9UK41 221 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 TBX21Q9UL17 535 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
VPS16-202ENST00000380445 STX7O15400 261 aaKnown RBP12.58□□□□□ -0.39
VPS16-202ENST00000380445 ZSCAN9O15535 394 aaPredicted RBP12.58□□□□□ -0.39
VPS16-202ENST00000380445 GPC4O75487 556 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 ZMPSTE24O75844 475 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 JUNP05412 331 aaKnown RBP12.58□□□□□ -0.39
VPS16-202ENST00000380445 PDHA1P08559 390 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 TPP2P29144 1249 aaPredicted RBP12.58□□□□□ -0.39
VPS16-202ENST00000380445 ART3Q13508 389 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 NCEH1Q6PIU2 408 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 CMTR2Q8IYT2 770 aaKnown RBP12.58□□□□□ -0.39
VPS16-202ENST00000380445 NKAPQ8N5F7 415 aaKnown RBP12.58□□□□□ -0.39
VPS16-202ENST00000380445 LPGAT1Q92604 370 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 PTERQ96BW5 349 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 FEM1AQ9BSK4 669 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 DERL2Q9GZP9 239 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 TMEM165Q9HC07 324 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 LSM7Q9UK45 103 aaKnown RBP12.58□□□□□ -0.39
VPS16-202ENST00000380445 POMPQ9Y244 141 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 FIS1Q9Y3D6 152 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 ASB3Q9Y575 518 aa12.58□□□□□ -0.39
VPS16-202ENST00000380445 COPG1Q9Y678 874 aaKnown RBP12.58□□□□□ -0.39
VPS16-202ENST00000380445 LCHNA4D1U4 455 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
VPS16-202ENST00000380445 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
VPS16-202ENST00000380445 HDCP19113 662 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 CD9P21926 228 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 MRPS35P82673 323 aaKnown RBP12.58□□□□□ -0.4
VPS16-202ENST00000380445 TIAL1Q01085 375 aaKnown RBP eCLIP12.58□□□□□ -0.4
VPS16-202ENST00000380445 CDH18Q13634 790 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 ANO7Q6IWH7 933 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 CHSY3Q70JA7 882 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 DSELQ8IZU8 1212 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 PGAM4Q8N0Y7 254 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 PELI3Q8N2H9 469 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 KIAA1191Q96A73 305 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 ZFRQ96KR1 1074 aaKnown RBP12.58□□□□□ -0.4
VPS16-202ENST00000380445 NSMCE3Q96MG7 304 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 S100A14Q9HCY8 104 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 LRCH1Q9Y2L9 728 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 COMMD10Q9Y6G5 202 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 WASF2Q9Y6W5 498 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 SYCE1LA8MT33 242 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 H7C0S8 307 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 EFCAB14O75071 495 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 PDE5AO76074 875 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 FMO4P31512 558 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 PPM1AP35813 382 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 KCNC1P48547 511 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 RHOAP61586 193 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 STX5Q13190 355 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 PEX6Q13608 980 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 SQLEQ14534 574 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 TMEM198Q66K66 360 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 CLYBLQ8N0X4 340 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 WBP2Q969T9 261 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 CCDC97Q96F63 343 aaPredicted RBP12.58□□□□□ -0.4
VPS16-202ENST00000380445 TTC1Q99614 292 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms