RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ZNF132P52740 706 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ARMC10Q8N2F6 343 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 MED28Q9H204 178 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 L7N2F9 121 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 VAMP2P63027 116 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 OCLNQ16625 522 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 RANBP3LQ86VV4 465 aaPredicted RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 MTMR9Q96QG7 549 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 AARSD1Q9BTE6 412 aaKnown RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 HMGXB4Q9UGU5 601 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 CIDEBQ9UHD4 219 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 CAPN13Q6MZZ7 669 aaPredicted RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 BORCS8Q96FH0 119 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 PANX1Q96RD7 426 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 CNTNAP4Q9C0A0 1308 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 TRIM64CA6NLI5 447 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 VIPP01282 170 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF20P17024 532 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 HNF4AP41235 474 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SLC2A14Q8TDB8 520 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ERGIC2Q96RQ1 377 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 IL1RAPQ9NPH3 570 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ATXN10Q9UBB4 475 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 LEF1Q9UJU2 399 aaPredicted RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 AGXTP21549 392 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF268Q14587 947 aaPredicted RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 AVL9Q8NBF6 648 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SEMA6AQ9H2E6 1030 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 MED31Q9Y3C7 131 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 DBTP11182 482 aaKnown RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 FGFR3P22607 806 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ADNP2Q6IQ32 1131 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 TAS1R3Q7RTX0 852 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 PCDH18Q9HCL0 1135 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ZFP14Q9HCL3 533 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SEMA4BQ9NPR2 832 aaPredicted RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 A0A1B0GVC2 190 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 PLOD2O00469 737 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 IDO1P14902 403 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 MGAT1P26572 445 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 GRIA3P42263 894 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ANKS1AQ92625 1134 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SERINC1Q9NRX5 453 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 TMX2Q9Y320 296 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 FAM205AQ6ZU69 1335 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF806P0C7X5 589 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 IL12AP29459 219 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 Q4G0T1 1027 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 PDSS1Q5T2R2 415 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 TTI2Q6NXR4 508 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 CXorf56Q9H5V9 222 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 NDST1P52848 882 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 CXorf57Q6NSI4 855 aaKnown RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 TXNDC11Q6PKC3 985 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 OR1I1O60431 355 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 INSRRP14616 1297 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 RPS9P46781 194 aaKnown RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 STXBP5Q5T5C0 1151 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 PTCD3Q96EY7 689 aaKnown RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 USB1Q9BQ65 265 aaKnown RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 ALDH8A1Q9H2A2 487 aaPredicted RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 RRAGCQ9HB90 399 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 DMTF1Q9Y222 760 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 RARGP13631 454 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 SP3Q02447 781 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 SLC13A2Q13183 592 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 UNC5BQ8IZJ1 945 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 OXNAD1Q96HP4 312 aaPredicted RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 CHP1Q99653 195 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 SPATA31A3Q5VYP0 1347 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 PPP3CAQ08209 521 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 SGCBQ16585 318 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 ERICH5Q6P6B1 374 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 SLC47A2Q86VL8 602 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 TSPAN18Q96SJ8 248 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 MAGI2Q86UL8 1455 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 ANXA2P2A6NMY6 339 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 ANXA2P07355 339 aaKnown RBP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 CCNB1P14635 433 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 CLCN5P51795 746 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF697Q5TEC3 545 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 PTCHD4Q6ZW05 846 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 MAFFQ9ULX9 164 aa11.21□□□□□ -0.61
PTCHD1-201ENST00000379361 PVALBP20472 110 aaPredicted RBP11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 ACTL9Q8TC94 416 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 SHDQ96IW2 340 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 TM6SF2Q9BZW4 377 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 OAS3Q9Y6K5 1087 aaKnown RBP11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 GRK5P34947 590 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 ENPEPQ07075 957 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 PCID2Q5JVF3 399 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 GCNT6Q5T4J0 391 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 POTEHQ6S545 545 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 RAVER1Q8IY67 606 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms