RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 CAPN6Q9Y6Q1 641 aa18.89■□□□□ 0.61
TMEM88B-201ENST00000378821 KIF26BQ2KJY2 2108 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 ATRXP46100 2492 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 hCG_1818297A0A087WSY0 165 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 A0A1W2PQM1 296 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 PRSS38A1L453 326 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 ZRANB2O95218 330 aaKnown RBP eCLIP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 CEACAM5P06731 702 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 PDHA1P08559 390 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 GLB1P16278 677 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 ZFXP17010 805 aaPredicted RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 CTNNA2P26232 953 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 ETV3P41162 512 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 ADCY2Q08462 1091 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 SPIDRQ14159 915 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 TFDP3Q5H9I0 405 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 CERCAMQ5T4B2 595 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 KAZNQ674X7 775 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 USP45Q70EL2 814 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 NT5DC3Q86UY8 548 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 C17orf82Q86X59 251 aaPredicted RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 CCDC50Q8IVM0 306 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 RAVER1Q8IY67 606 aaKnown RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 RCOR2Q8IZ40 523 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 PAF1Q8N7H5 531 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 WDR36Q8NI36 951 aaKnown RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 SCARF2Q96GP6 870 aaPredicted RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 RBM41Q96IZ5 413 aaKnown RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 OLFM3Q96PB7 478 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 UBL7Q96S82 380 aaPredicted RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 LGMNQ99538 433 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 SEMA3CQ99985 751 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 DPH1Q9BZG8 443 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 POLR1EQ9GZS1 481 aaKnown RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 PHPT1Q9NRX4 125 aaPredicted RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 SIRPGQ9P1W8 387 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 PCDHA3Q9Y5H8 950 aa18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 ARHGEF17Q96PE2 2063 aaPredicted RBP18.88■□□□□ 0.61
TMEM88B-201ENST00000378821 CST8O60676 142 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 PRLP01236 227 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 CCL7P80098 99 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 CDK3Q00526 305 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 PPIDQ08752 370 aaKnown RBP18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 CCDC173Q0VFZ6 552 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 TFDP2Q14188 446 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 HLTFQ14527 1009 aaKnown RBP eCLIP18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 PTPRRQ15256 657 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 C3orf38Q5JPI3 329 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 Q6ZVL8 140 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 TAF8Q7Z7C8 310 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 CLEC14AQ86T13 490 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 TSPAN33Q86UF1 283 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 HEATR4Q86WZ0 1026 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 CCDC13Q8IYE1 715 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 CCNYQ8ND76 341 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 FAM46DQ8NEK8 389 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 ARRDC2Q8TBH0 407 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 CYP4F12Q9HCS2 524 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 TRNAU1APQ9NX07 287 aaKnown RBP18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 SLC17A4Q9Y2C5 497 aa18.87■□□□□ 0.61
TMEM88B-201ENST00000378821 CCDC187A0A096LP49 1063 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 A0A0J9YYE9 177 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 CCDC66A2RUB6 948 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 D6RAR5 112 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 TMX2-CTNND1H3BSU7 103 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 FTCDO95954 541 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 SOD1P00441 154 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 TRBC1P01850 177 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 HLA-DQB2P05538 268 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 PECAM1P16284 738 aaPredicted RBP18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 ZNF30P17039 623 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 CCKBRP32239 447 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 PTSQ03393 145 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 COL9A2Q14055 689 aaPredicted RBP18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 PPP2R5EQ16537 467 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 C14orf28Q4W4Y0 310 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 ZNF765Q7L2R6 523 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 NRROSQ86YC3 692 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 LSM14AQ8ND56 463 aaKnown RBP18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 CCL4L1Q8NHW4 92 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 SNRNP27Q8WVK2 155 aaKnown RBP18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 ALG3Q92685 438 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 GFM1Q96RP9 751 aaKnown RBP18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 HERPUD2Q9BSE4 406 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 TSGA10Q9BZW7 698 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 LRRN3Q9H3W5 708 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 SAE1Q9UBE0 346 aaPredicted RBP18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 AMFRQ9UKV5 643 aa18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 PACSIN2Q9UNF0 486 aaPredicted RBP18.86■□□□□ 0.61
TMEM88B-201ENST00000378821 SCN8AQ9UQD0 1980 aa18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 PMS2P1A4D2B8 440 aa18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 TK2O00142 265 aa18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 PPP1R12AO14974 1030 aaPredicted RBP18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 NUDT21O43809 227 aaKnown RBP18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 IVLP07476 585 aa18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 CCNB1P14635 433 aa18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 RBMS1P29558 406 aaKnown RBP18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 RPL26P61254 145 aaKnown RBP18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 ZFP36L1Q07352 338 aaKnown RBP18.85■□□□□ 0.61
TMEM88B-201ENST00000378821 EIF3IQ13347 325 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms