RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 TARBP1Q13395 1621 aaKnown RBP14.09□□□□□ -0.15
TRIM13-202ENST00000378182 ATP6AP2A0A1C7CYW4 349 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 ATP6AP2O75787 350 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 DDX6P26196 483 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRIM13-202ENST00000378182 TKTP29401 623 aaKnown RBP14.09□□□□□ -0.15
TRIM13-202ENST00000378182 MAPK8P45983 427 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 MYBPC3Q14896 1274 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 CYP27C1Q4G0S4 372 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 RBFAQ8N0V3 343 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 ZCCHC7Q8N3Z6 543 aaKnown RBP14.09□□□□□ -0.15
TRIM13-202ENST00000378182 LCN9Q8WX39 176 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 ITCHQ96J02 903 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 C9orf16Q9BUW7 83 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 ADAM7Q9H2U9 754 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 PCDHGC5Q9Y5F6 944 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 U3KQV3 271 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 ZNF521Q96K83 1311 aa14.09□□□□□ -0.15
TRIM13-202ENST00000378182 ZNF432O94892 652 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 IFNGP01579 166 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 IDSP22304 550 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 NRG3P56975 720 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 CXXC5Q7LFL8 322 aaKnown RBP14.08□□□□□ -0.15
TRIM13-202ENST00000378182 ARL14EPQ8N8R7 260 aaPredicted RBP14.08□□□□□ -0.15
TRIM13-202ENST00000378182 ANKFN1Q8N957 763 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 ZNF540Q8NDQ6 660 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 OR2L3Q8NG85 312 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 XAGE5Q8WWM1 108 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 SRMSQ9H3Y6 488 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 BCORL1Q5H9F3 1711 aa14.08□□□□□ -0.15
TRIM13-202ENST00000378182 SAP18O00422 153 aaKnown RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 TNFRSF21O75509 655 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 SERPINB7O75635 380 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 GPM6BQ13491 265 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 CRY2Q49AN0 593 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 ATAD1Q8NBU5 361 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 SLAIN1Q8ND83 568 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 ASB2Q96Q27 587 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 MOCS1Q9NZB8 636 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 RIMKLBQ9ULI2 386 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 SERPINA1P01009 418 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 RPL14P50914 215 aaKnown RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 FCF1Q9Y324 198 aaKnown RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 A0A0A0MRY4 1105 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 CLCNKBP51801 687 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 CERCAMQ5T4B2 595 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 TMEM164Q5U3C3 297 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 C8orf59Q8N0T1 100 aaPredicted RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 DHRSXQ8N5I4 330 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 ARMC5Q96C12 935 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 FCRL2Q96LA5 508 aaPredicted RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 SPATA13Q96N96 652 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 MED31Q9Y3C7 131 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 COL5A2P05997 1499 aaPredicted RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 GLYATL1P3A0A0U1RQE8 302 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 BTBD19C9JJ37 291 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 BTN3A3O00478 584 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 STATHP02808 62 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 MSX1P28360 303 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 PRKAA2P54646 552 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 USP4Q13107 963 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 ENPP7Q6UWV6 458 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 ZMIZ2Q8NF64 920 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.08□□□□□ -0.165e-7■■■■■ 28.2
TRIM13-202ENST00000378182 TAS2R14Q9NYV8 317 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 AFDNP55196 1824 aaKnown RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 IL33O95760 270 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 CCNOP22674 350 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 HECTD2Q5U5R9 776 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 PRSS55Q6UWB4 352 aaPredicted RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 ZNF75CPQ92670 426 aaPredicted RBP14.08□□□□□ -0.16
TRIM13-202ENST00000378182 ART5Q96L15 291 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 COPS8Q99627 209 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 TAPBPLQ9BX59 468 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 TMCO1Q9UM00 188 aa14.08□□□□□ -0.16
TRIM13-202ENST00000378182 AOC2O75106 756 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 DBTP11182 482 aaKnown RBP14.07□□□□□ -0.16
TRIM13-202ENST00000378182 GDI1P31150 447 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 PTPN9P43378 593 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 PIK3R6Q5UE93 754 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 BEND7Q8N7W2 519 aaPredicted RBP14.07□□□□□ -0.16
TRIM13-202ENST00000378182 PIH1D2Q8WWB5 315 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 EBPLQ9BY08 206 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 EXD2Q9NVH0 621 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 EGFL7Q9UHF1 273 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 TRIM64BA6NI03 449 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 SIGLEC16A6NMB1 481 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 UBAP2LQ14157 1087 aaKnown RBP14.07□□□□□ -0.16
TRIM13-202ENST00000378182 KBTBD2Q8IY47 623 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 FAM198AQ9UFP1 575 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 SAMHD1Q9Y3Z3 626 aaKnown RBP14.07□□□□□ -0.16
TRIM13-202ENST00000378182 RAB10P61026 200 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 ACAP1Q15027 740 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 ZBTB6Q15916 424 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 ALG1LQ6GMV1 187 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 CAPN13Q6MZZ7 669 aaPredicted RBP14.07□□□□□ -0.16
TRIM13-202ENST00000378182 LDB1Q86U70 411 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms