RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 KIAA0930Q6ICG6 404 aaPredicted RBP16.6■□□□□ 0.25
PCDHA1-201ENST00000378133 HASPINQ8TF76 798 aa16.6■□□□□ 0.25
PCDHA1-201ENST00000378133 ACDQ96AP0 544 aa16.6■□□□□ 0.25
PCDHA1-201ENST00000378133 TMEM209Q96SK2 561 aa16.6■□□□□ 0.25
PCDHA1-201ENST00000378133 PALMDQ9NP74 551 aa16.6■□□□□ 0.25
PCDHA1-201ENST00000378133 FLRT1Q9NZU1 646 aa16.6■□□□□ 0.25
PCDHA1-201ENST00000378133 CORINQ9Y5Q5 1042 aa16.6■□□□□ 0.25
PCDHA1-201ENST00000378133 CFAP99D6REC4 459 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 IRAK2O43187 625 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 IPO13O94829 963 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 MOCS2O96007 188 aaPredicted RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 TSPAN8P19075 237 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 CA8P35219 290 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 KPNA2P52292 529 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 CUZD1Q86UP6 607 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 ZC3H7AQ8IWR0 971 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 AFAP1L2Q8N4X5 818 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 PTCD2Q8WV60 388 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 SEPT8Q92599 483 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 ZUFSPQ96AP4 578 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 ITPKCQ96DU7 683 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 CATSPERBQ9H7T0 1116 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 MEAF6Q9HAF1 191 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 AGPAT4Q9NRZ5 378 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 IGLV3-25P01717 112 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 CCNA2P20248 432 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 BRCC3P46736 316 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 WNT3AP56704 352 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 NFATC3Q12968 1075 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 EIF4EBP2Q13542 120 aaPredicted RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 INPP5AQ14642 412 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 AGAP9Q5VTM2 703 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 CST9Q5W186 159 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 C8orf82Q6P1X6 216 aaPredicted RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 CHST15Q7LFX5 561 aaPredicted RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 LRRTM3Q86VH5 581 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 TRUB1Q8WWH5 349 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 FAR2Q96K12 515 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 MRM3Q9HC36 420 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 CD320Q9NPF0 282 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 OAZ3Q9UMX2 235 aa16.59■□□□□ 0.25
PCDHA1-201ENST00000378133 C1orf232A0A0U1RR37 186 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 TRIM64BA6NI03 449 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 LSM1O15116 133 aaKnown RBP16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 B3GAT3O94766 335 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 CYP2C18P33260 490 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 GNA12Q03113 381 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 UPP1Q16831 310 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 FAM117BQ6P1L5 589 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 TMEM53Q6P2H8 277 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 HACD2Q6Y1H2 254 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 LDB1Q86U70 411 aaPredicted RBP16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 CCDC117Q8IWD4 279 aaPredicted RBP16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 COLGALT2Q8IYK4 626 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 ANKRD49Q8WVL7 239 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 CASP10Q92851 521 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 IL1RL2Q9HB29 575 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 EGFL7Q9UHF1 273 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 ERGIC3Q9Y282 383 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 SLC45A1Q9Y2W3 748 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 MTF2Q9Y483 593 aaPredicted RBP16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 SLC30A1Q9Y6M5 507 aa16.58■□□□□ 0.25
PCDHA1-201ENST00000378133 FNDC1Q4ZHG4 1894 aaPredicted RBP16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 ATP6AP2A0A1C7CYW4 349 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 ATP6AP2O75787 350 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 ZNF865P0CJ78 1059 aaPredicted RBP16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 PSMA4P25789 261 aaKnown RBP16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 ZNF362Q5T0B9 420 aaPredicted RBP16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 FAM171BQ6P995 826 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 AGMOQ6ZNB7 445 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 NANOGNBQ7Z5D8 188 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 C14orf80Q86SX3 495 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 CMTR2Q8IYT2 770 aaKnown RBP16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 DHRSXQ8N5I4 330 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 CENPNQ96H22 339 aaPredicted RBP16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 MTG1Q9BT17 334 aaPredicted RBP16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 C1orf50Q9BV19 199 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 EML4Q9HC35 981 aaKnown RBP16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 TMEM9Q9P0T7 183 aa16.58■□□□□ 0.24
PCDHA1-201ENST00000378133 CCL22O00626 93 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 CTSHP09668 335 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 LTA4HP09960 611 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 YWHAQP27348 245 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 CCR1P32246 355 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 YAP1P46937 504 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 EIF2B2P49770 351 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 MAXP61244 160 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 FKBP1BP68106 108 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 CYP2A13Q16696 494 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 ARTNQ5T4W7 220 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 CLEC6AQ6EIG7 209 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 PCYOX1LQ8NBM8 494 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 TRIM15Q9C019 465 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 ZFYVE28Q9HCC9 887 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 AQP12BA6NM10 295 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 FGF10O15520 208 aaPredicted RBP16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 BCL10O95999 233 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 CPT1AP50416 773 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 KCNC4Q03721 635 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 ITKQ08881 620 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms