RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 SHMT1P34896 483 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 RNF144AP50876 292 aaPredicted RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 AKR1D1P51857 326 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 C2orf80Q0P641 193 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 MSANTD2Q6P1R3 559 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 ZZZ3Q8IYH5 903 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 HJURPQ8NCD3 748 aaPredicted RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 YIPF4Q9BSR8 244 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 CHID1Q9BWS9 393 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 NXF3Q9H4D5 531 aaKnown RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 CTPS2Q9NRF8 586 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 DGKBQ9Y6T7 804 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 WASF2Q9Y6W5 498 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 ARCN1P48444 511 aaKnown RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 NAGLUP54802 743 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 WDR59Q6PJI9 974 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 OTOP3Q7RTS5 596 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 OR4L1Q8NH43 312 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 HMGB4Q8WW32 186 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 CHIAQ9BZP6 476 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 DCLRE1BQ9H816 532 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 ARHGAP20Q9P2F6 1191 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 STOML2Q9UJZ1 356 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 RPS6KA6Q9UK32 745 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 NOX1Q9Y5S8 564 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 SPHKAPQ2M3C7 1700 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 KMOO15229 486 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 SP2Q02086 613 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 PPIDQ08752 370 aaKnown RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 C4orf46Q504U0 113 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 UBAP2Q5T6F2 1119 aaKnown RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 UBE2E3Q969T4 207 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 AP2A2O94973 939 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 RPL17P18621 184 aaKnown RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 UBA1P22314 1058 aaKnown RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 EARS2Q5JPH6 523 aaKnown RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 INTS11Q5TA45 600 aaKnown RBP16.3■□□□□ 0.2
RGP1-201ENST00000378078 DUPD1Q68J44 220 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 C1orf94Q6P1W5 598 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 NAPRTQ6XQN6 538 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 ZNF607Q96SK3 696 aa16.3■□□□□ 0.2
RGP1-201ENST00000378078 MTX3Q5HYI7 312 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 NAIF1Q69YI7 327 aaPredicted RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 GDF6Q6KF10 455 aaPredicted RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 SNRNP25Q9BV90 132 aaKnown RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 ADAM7Q9H2U9 754 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 BATF3Q9NR55 127 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 CCL22O00626 93 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 EIF1AYO14602 144 aaKnown RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 FPGTO14772 594 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 SEMA3DO95025 777 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 DGKEP52429 567 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 CDH13P55290 713 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 ENPEPQ07075 957 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 SWI5Q1ZZU3 235 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 C2orf27AQ580R0 203 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 TOR1AIP1Q5JTV8 583 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 COLEC12Q5KU26 742 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 GALNT13Q8IUC8 556 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 SEMA3GQ9NS98 782 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 HCN3Q9P1Z3 774 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 FCF1Q9Y324 198 aaKnown RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 ZFP37Q9Y6Q3 630 aaPredicted RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 ACKR2O00590 384 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 DDX6P26196 483 aaKnown RBP eCLIP16.29■□□□□ 0.2
RGP1-201ENST00000378078 MNDAP41218 407 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 TXNL4AP83876 142 aaKnown RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 PURAQ00577 322 aaKnown RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 TMEM86AQ8N2M4 240 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 OR7A2PQ8NGA2 310 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 ACTRT1Q8TDG2 376 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 CCDC177Q9NQR7 707 aaPredicted RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 RBMX2Q9Y388 322 aaKnown RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 A0A0X1KG70 313 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 HACD1B0YJ81 288 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 PLIN3O60664 434 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 FGBP02675 491 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 SNRPB2P08579 225 aaKnown RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 HSF2Q03933 536 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 MXD1Q05195 221 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 NAE1Q13564 534 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 CHSY3Q70JA7 882 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 RP9Q8TA86 221 aaKnown RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 TRPM4Q8TD43 1214 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 ADAMTS15Q8TE58 950 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 IL22Q9GZX6 179 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 SLC24A2Q9UI40 661 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 GRM6O15303 877 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 ZNF16P17020 682 aaPredicted RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 RAB2AP61019 212 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 TAPT1Q6NXT6 567 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 VITQ6UXI7 678 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 SUN3Q8TAQ9 357 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 ITCHQ96J02 903 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 IL17RBQ9NRM6 502 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 COPS7AQ9UBW8 275 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 USP50Q70EL3 339 aaPredicted RBP16.29■□□□□ 0.2
RGP1-201ENST00000378078 SSR3Q9UNL2 185 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 CLTCL1P53675 1640 aa16.29■□□□□ 0.2
RGP1-201ENST00000378078 YDJCA8MPS7 323 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms