RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 TRIM32Q13049 653 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 MAPRE1Q15691 268 aaKnown RBP15.85■□□□□ 0.13
CKAP4-201ENST00000378026 TMEM236Q5W0B7 351 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 SCIMPQ6UWF3 145 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 FRA10AC1Q70Z53 315 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 ZCCHC7Q8N3Z6 543 aaKnown RBP15.85■□□□□ 0.13
CKAP4-201ENST00000378026 TTC39CQ8N584 583 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 PDPRQ8NCN5 879 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 CAPSLQ8WWF8 208 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 HTRA1Q92743 480 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 BIRC7Q96CA5 298 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 R3HDMLQ9H3Y0 253 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 SMURF2Q9HAU4 748 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 LTA4HP09960 611 aaKnown RBP15.85■□□□□ 0.13
CKAP4-201ENST00000378026 MAGP20916 626 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 ARCN1P48444 511 aaKnown RBP15.85■□□□□ 0.13
CKAP4-201ENST00000378026 MFSD4BQ5TF39 518 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 SLC22A16Q86VW1 577 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 HS3ST5Q8IZT8 346 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 MINDY1Q8N5J2 469 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 PPHLN1Q8NEY8 458 aaKnown RBP15.85■□□□□ 0.13
CKAP4-201ENST00000378026 AFG1LQ8WV93 481 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 NSMCE3Q96MG7 304 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 NSUN5Q96P11 429 aaKnown RBP15.85■□□□□ 0.13
CKAP4-201ENST00000378026 TBL1YQ9BQ87 522 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 ATP13A3Q9H7F0 1226 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 VWA7Q9Y334 891 aa15.85■□□□□ 0.13
CKAP4-201ENST00000378026 CRHBPP24387 322 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 PAGE3Q5JUK9 113 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 PIM3Q86V86 326 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 TBC1D21Q8IYX1 336 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 PNPT1Q8TCS8 783 aaKnown RBP15.84■□□□□ 0.13
CKAP4-201ENST00000378026 GLMNQ92990 594 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 WNT8BQ93098 351 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 TEX37Q96LM6 180 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 DNMT3BQ9UBC3 853 aaKnown RBP15.84■□□□□ 0.13
CKAP4-201ENST00000378026 STAP1Q9ULZ2 295 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 PCDHGA8Q9Y5G5 932 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 ZNF646O15015 1829 aaPredicted RBP15.84■□□□□ 0.13
CKAP4-201ENST00000378026 GAS2O43903 313 aaKnown RBP15.84■□□□□ 0.13
CKAP4-201ENST00000378026 PGK2P07205 417 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 FSHRP23945 695 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 OAZ1P54368 228 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 ARSFP54793 590 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 SLC13A2Q13183 592 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 SELENBP1Q13228 472 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 TIGD2Q4W5G0 525 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 NEPROQ6NW34 567 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 CATSPER4Q7RTX7 472 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 THAP5Q7Z6K1 395 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 TWIST2Q8WVJ9 160 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 TMBIM1Q969X1 311 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 TMEM125Q96AQ2 219 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 BDH2Q9BUT1 245 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 MRGBPQ9NV56 204 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 PCDHGA11Q9Y5H2 935 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 NOX1Q9Y5S8 564 aa15.84■□□□□ 0.13
CKAP4-201ENST00000378026 NADKO95544 446 aaPredicted RBP15.83■□□□□ 0.13
CKAP4-201ENST00000378026 PRMT9Q6P2P2 845 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 ANKRD13BQ86YJ7 626 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 CLIP4Q8N3C7 705 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 NDNFQ8TB73 568 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 NPY6RQ99463 290 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 TOR3AQ9H497 397 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 NOL6Q9H6R4 1146 aaKnown RBP15.83■□□□□ 0.13
CKAP4-201ENST00000378026 TRHDEQ9UKU6 1024 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 PCDHB3Q9Y5E6 796 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 PCDHA9Q9Y5H5 950 aa15.83■□□□□ 0.13
CKAP4-201ENST00000378026 TCRBV5S2A0A599 114 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 BBIP1A8MTZ0 92 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 M0R3G1 203 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 NR4A2P43354 598 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 SLC16A12Q6ZSM3 486 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 LINC00523Q86TU6 105 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 C8orf59Q8N0T1 100 aaPredicted RBP15.83■□□□□ 0.12
CKAP4-201ENST00000378026 CLYBLQ8N0X4 340 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 EDEM1Q92611 657 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 FKBP10Q96AY3 582 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 YTHDF1Q9BYJ9 559 aaKnown RBP15.83■□□□□ 0.12
CKAP4-201ENST00000378026 INTS7Q9NVH2 962 aaKnown RBP15.83■□□□□ 0.12
CKAP4-201ENST00000378026 DDIT4Q9NX09 232 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 TIMM22Q9Y584 194 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 THRBP10828 461 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 ACADSBP45954 432 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 CXCR3P49682 368 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 POU4F1Q01851 419 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 LAPTM5Q13571 262 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 UNC50Q53HI1 259 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 ZNF678Q5SXM1 525 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 GJC2Q5T442 439 aaPredicted RBP15.83■□□□□ 0.12
CKAP4-201ENST00000378026 IRAK1BP1Q5VVH5 260 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 TAF2Q6P1X5 1199 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 CATSPERGQ6ZRH7 1159 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 CCDC126Q96EE4 140 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 SIK2Q9H0K1 926 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 PLEKHA5Q9HAU0 1116 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 GOLGA2P5Q9HBQ8 144 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 CRYL1Q9Y2S2 319 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 SNX5Q9Y5X3 404 aa15.83■□□□□ 0.12
CKAP4-201ENST00000378026 CITO14578 2027 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms