RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TMCO1Q9UM00 188 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 PHF24Q9UPV7 400 aa14.49□□□□□ -0.09
TCOF1-202ENST00000377797 CHRNB3Q05901 458 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 RING1Q06587 406 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 ACSM2AQ08AH3 577 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 KRT72Q14CN4 511 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 TAF1AQ15573 450 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-202ENST00000377797 CPSF6Q16630 551 aaKnown RBP eCLIP14.48□□□□□ -0.093e-9■□□□□ 9
TCOF1-202ENST00000377797 VWA5B1Q5TIE3 1220 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 FAM46CQ5VWP2 391 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 ACSM2BQ68CK6 577 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 RRM2BQ7LG56 351 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 TMCO2Q7Z6W1 182 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-202ENST00000377797 PIGWQ7Z7B1 504 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 VPS50Q96JG6 964 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 A0A0D9SEW6 157 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 A0A1W2PQ67 120 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 E7ESA3 106 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 PFDN1O60925 122 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 WASP42768 502 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 HK2P52789 917 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 CACNA2D1P54289 1103 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 USP46P62068 366 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 SERINC3Q13530 473 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 PLCL1Q15111 1095 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 CYP2R1Q6VVX0 501 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 OOSP2Q86WS3 158 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 CYGBQ8WWM9 190 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 FAM120BQ96EK7 910 aaKnown RBP14.48□□□□□ -0.09
TCOF1-202ENST00000377797 CDKN2AIPNLQ96HQ2 116 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 C1QTNF7Q9BXJ2 289 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 BRD9Q9H8M2 597 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 SNX5Q9Y5X3 404 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 CCDC85CA6NKD9 419 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 OTCP00480 354 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 SNRPB2P08579 225 aaKnown RBP14.48□□□□□ -0.09
TCOF1-202ENST00000377797 CAP1Q01518 475 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 GPM6BQ13491 265 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 ACAP2Q15057 778 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 PM20D1Q6GTS8 502 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 PACS2Q86VP3 889 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 NPWQ8N729 165 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 FAM83DQ9H4H8 585 aa14.48□□□□□ -0.09
TCOF1-202ENST00000377797 CORO1CQ9ULV4 474 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-202ENST00000377797 LINC00032P0C843 101 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 DGKGP49619 791 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 NAA20P61599 178 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 PLOD1Q02809 727 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 KLHDC9Q8NEP7 349 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 IGSF8Q969P0 613 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 KLHL32Q96NJ5 620 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 HEPHQ9BQS7 1158 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 PSAT1Q9Y617 370 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 KANSL1LA0AUZ9 987 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 ENTPD5O75356 428 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 AHSGP02765 367 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 ACADSP16219 412 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 OGNP20774 298 aaKnown RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 DSG1Q02413 1049 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 SAMD4BQ5PRF9 694 aaKnown RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 SERPINA9Q86WD7 417 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 ATL1Q8WXF7 558 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 POLR3BQ9NW08 1133 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 MTRRQ9UBK8 725 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 CDK14O94921 469 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 UBTFL6P0CB48 400 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 PABPC1P11940 636 aaKnown RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 GPC1P35052 558 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 IRF9Q00978 393 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 SLC44A2Q8IWA5 706 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 UMODL1-AS1Q8N2C9 162 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 ZNF781Q8N8C0 355 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 KCTD14Q9BQ13 255 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 ZFP14Q9HCL3 533 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 GIMAP4Q9NUV9 329 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 PRAMEF11O60813 436 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 RPN2P04844 631 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 NEK3P51956 506 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 SLC34A1Q06495 639 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 SQLEQ14534 574 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 CBX2Q14781 532 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-202ENST00000377797 LRRC73Q5JTD7 316 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 PIK3R6Q5UE93 754 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 CPNE9Q8IYJ1 553 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 POF1BQ8WVV4 589 aa14.47□□□□□ -0.09
TCOF1-202ENST00000377797 ZNF840PA6NDX5 716 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 EPHX1P07099 455 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 SLC18A1P54219 525 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 BNIP1Q12981 228 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 ZC3HC1Q86WB0 502 aaKnown RBP14.46□□□□□ -0.09
TCOF1-202ENST00000377797 DHFR2Q86XF0 187 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 KLHL23Q8NBE8 558 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 TIFAQ96CG3 184 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 RCN3Q96D15 328 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 ZNF317Q96PQ6 595 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-202ENST00000377797 MIEF1Q9NQG6 463 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 CD84Q9UIB8 345 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 MYO18AQ92614 2054 aaKnown RBP14.46□□□□□ -0.09
TCOF1-202ENST00000377797 PIK3R1P27986 724 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 ARL4DP49703 201 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms