RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SERPINB5P36952 375 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 SKIV2L2P42285 1042 aaKnown RBP11.08□□□□□ -0.63
PDPN-202ENST00000376057 HK2P52789 917 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 OCRLQ01968 901 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 ASPHQ12797 758 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 FAM83EQ2M2I3 478 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 HNRNPA1L2Q32P51 320 aaKnown RBP11.08□□□□□ -0.63
PDPN-202ENST00000376057 ACCSLQ4AC99 568 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 AGAP9Q5VTM2 703 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 Q6ZVU0 165 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 PLD6Q8N2A8 252 aaKnown RBP11.08□□□□□ -0.63
PDPN-202ENST00000376057 SMRP1Q8NCR6 262 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 CCDC126Q96EE4 140 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 BIRC8Q96P09 236 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 OLFM1Q99784 485 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 LATS2Q9NRM7 1088 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 SMOXQ9NWM0 555 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 THAP10Q9P2Z0 257 aaPredicted RBP11.08□□□□□ -0.63
PDPN-202ENST00000376057 FKBPLQ9UIM3 349 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 ARL2BPQ9Y2Y0 163 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 OAS3Q9Y6K5 1087 aaKnown RBP11.08□□□□□ -0.63
PDPN-202ENST00000376057 DOCK8Q8NF50 2099 aa11.08□□□□□ -0.63
PDPN-202ENST00000376057 OR51F1A6NGY5 319 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 GOLGA8CPA6NN73 597 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 TTC34A8MYJ7 566 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 H0Y858 1186 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 H3BMM5 538 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 SRP72O76094 671 aaKnown RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 PRNPP04156 253 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 SERPINE1P05121 402 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 LTA4HP09960 611 aaKnown RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 FGF3P11487 239 aaPredicted RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 PMLP29590 882 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 VIPR1P32241 457 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 GJA4P35212 333 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 SPAM1P38567 509 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 GRIA2P42262 883 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 TNFRSF4P43489 277 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 CCDC15Q0P6D6 951 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 PTPRCAPQ14761 206 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 DPPA4Q7L190 304 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 OTOAQ7RTW8 1153 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 RYBPQ8N488 228 aaPredicted RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 RHEBL1Q8TAI7 183 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 ULK4Q96C45 1275 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 TSSK1BQ9BXA7 367 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 PLA2G2FQ9BZM2 168 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 BRD9Q9H8M2 597 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 SYTL2Q9HCH5 934 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 OXSMQ9NWU1 459 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 SUN2Q9UH99 717 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 PLXNA2O75051 1894 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 C1orf232A0A0U1RR37 186 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 NPIPB15A6NHN6 443 aaPredicted RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 PRRT4C9JH25 899 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 NDUFS3O75489 264 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 ALPIP09923 528 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 SLC6A11P48066 632 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 NUMBP49757 651 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 NAA20P61599 178 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 PTSQ03393 145 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 ITPRIPL2Q3MIP1 535 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 RBM20Q5T481 1227 aaKnown RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 LRRC8EQ6NSJ5 796 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 TBC1D1Q86TI0 1168 aaPredicted RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 GPATCH11Q8N954 259 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 CHST14Q8NCH0 376 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 KCNJ9Q92806 393 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 PDLIM5Q96HC4 596 aaKnown RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 FAM107BQ9H098 131 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 MRPL46Q9H2W6 279 aaKnown RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 C12orf65Q9H3J6 166 aaKnown RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 HAO1Q9UJM8 370 aa11.08□□□□□ -0.64
PDPN-202ENST00000376057 RUVBL2Q9Y230 463 aaKnown RBP11.08□□□□□ -0.64
PDPN-202ENST00000376057 UPK3BL1B0FP48 263 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 UPK3BL2E5RIL1 263 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 SBK3P0C264 359 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 TIMP2P16035 220 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 BPIP17213 487 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 BGNP21810 368 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 CDKN2DP55273 166 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 TMPRSS15P98073 1019 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 IRF9Q00978 393 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 NFATC2Q13469 925 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 C9orf64Q5T6V5 341 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 UGT3A1Q6NUS8 523 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 KLC3Q6P597 504 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 NLRP8Q86W28 1048 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 NRSN1Q8IZ57 195 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 OR6K2Q8NGY2 324 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 NXPE3Q969Y0 559 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 ATXN7L3BQ96GX2 97 aa11.07□□□□□ -0.64
PDPN-202ENST00000376057 ELAC2Q9BQ52 826 aaKnown RBP11.07□□□□□ -0.64
PDPN-202ENST00000376057 TRMT61BQ9BVS5 477 aaKnown RBP11.07□□□□□ -0.64
PDPN-202ENST00000376057 FAM96AQ9H5X1 160 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms