RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MAPK8P45983 427 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 THOP1P52888 689 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 OGDHQ02218 1023 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 ITGA7Q13683 1181 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 UNC5BQ8IZJ1 945 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 NELL1Q92832 810 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 ROPN1LQ96C74 230 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 UROC1Q96N76 676 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 YIPF2Q9BWQ6 316 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 SLC17A6Q9P2U8 582 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 ERGIC3Q9Y282 383 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 ITM2BQ9Y287 266 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 COL1A2P08123 1366 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 CCL22O00626 93 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 TNFRSF21O75509 655 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 HOXB6P17509 224 aaKnown RBP11.52□□□□□ -0.57
PTCH1-203ENST00000375274 CCNFP41002 786 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 GNPDA1P46926 289 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 TRAP1Q12931 704 aaKnown RBP11.52□□□□□ -0.57
PTCH1-203ENST00000375274 SIM2Q14190 667 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-203ENST00000375274 FAM182AQ5T1J6 154 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 EGFLAMQ63HQ2 1017 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 CNSTQ6PJW8 725 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 PAOXQ6QHF9 649 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 DENND1CQ8IV53 801 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 ARRDC4Q8NCT1 418 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 ELMO1Q92556 727 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 EMID1Q96A84 441 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-203ENST00000375274 BBS4Q96RK4 519 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 SLC25A51Q9H1U9 297 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 ABCG8Q9H221 673 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 TMPRSS4Q9NRS4 437 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 SLC22A2O15244 555 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 AMHP03971 560 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ITGA2P17301 1181 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 XRCC1P18887 633 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 IL12AP29459 219 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 FEN1P39748 380 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CLCQ05315 142 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 PLD1Q13393 1074 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 FBXO48Q5FWF7 155 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 OOSP2Q86WS3 158 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 RELL1Q8IUW5 271 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 RBFAQ8N0V3 343 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 LMO3Q8TAP4 145 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 OMA1Q96E52 524 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 DNAJC1Q96KC8 554 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 PCDHAC1Q9H158 963 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CLN6Q9NWW5 311 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 HMGXB4Q9UGU5 601 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 AKAP12Q02952 1782 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 SMIM35A0A1B0GVV1 85 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 FAM159BA6NKW6 160 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 KPNA3O00505 521 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ALOX5P09917 674 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CKMT2P17540 419 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 AOC1P19801 751 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 NOS3P29474 1203 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ECHS1P30084 290 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CENPAP49450 140 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 LILRA4P59901 499 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 KCNJ11Q14654 390 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 DUSP28Q4G0W2 176 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 PITRM1Q5JRX3 1037 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ARMC3Q5W041 872 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 DENND5AQ6IQ26 1287 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 PAGE2Q7Z2X7 111 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TRIM48Q8IWZ4 208 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 BORCS6Q96GS4 357 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CHID1Q9BWS9 393 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 MRPL9Q9BYD2 267 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 MATN3O15232 486 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TYROBPO43914 113 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 GRIN3BO60391 1043 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CYP2A6P11509 494 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 IFNGR2P38484 337 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 NDUFV1P49821 464 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 RPS6KA3P51812 740 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 MTTPP55157 894 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TGM3Q08188 693 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 COX10Q12887 443 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TCEAL1Q15170 157 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CDC73Q6P1J9 531 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 SLC39A4Q6P5W5 647 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TPGS1Q6ZTW0 290 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ZC3H7AQ8IWR0 971 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CLHC1Q8NHS4 586 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 SOCS4Q8WXH5 440 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 COPS8Q99627 209 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 GPR21Q99679 349 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TDRD1Q9BXT4 1180 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 NLNQ9BYT8 704 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 SLC7A5P2Q9GIP4 190 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 KLHL1Q9NR64 748 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ATP6V1HQ9UI12 483 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 SAMD4AQ9UPU9 718 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ADAMTSL3P82987 1691 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 NPEPPSL1A6NEC2 478 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 NEMP2A6NFY4 417 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms