RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 RBM15BQ8NDT2 890 aaKnown RBP8.21□□□□□ -1.09
UBR4-202ENST00000375224 STMN2Q93045 179 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 CGREF1Q99674 301 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 IGSF5Q9NSI5 407 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 CATSPERZQ9NTU4 200 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 INTS10Q9NVR2 710 aaKnown RBP8.21□□□□□ -1.09
UBR4-202ENST00000375224 STOML2Q9UJZ1 356 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 TBX21Q9UL17 535 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 VPS9D1Q9Y2B5 631 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 TRPC5OSA6NMA1 111 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 C2orf81A6NN90 581 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 TM7SF2O76062 418 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 MYCP01106 439 aaPredicted RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 TFEBP19484 476 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 PMLP29590 882 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 RPS24P62847 133 aaKnown RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 PFKPQ01813 784 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 TAF1AQ15573 450 aaPredicted RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 TECRLQ5HYJ1 363 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 RBM20Q5T481 1227 aaKnown RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 FOXB2Q5VYV0 432 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 DUS1LQ6P1R4 473 aaKnown RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 NET1Q7Z628 596 aaPredicted RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 BPHLQ86WA6 291 aaPredicted RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 OR4L1Q8NH43 312 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 ZNF689Q96CS4 500 aaPredicted RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 TBATAQ96M53 351 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 TRIB3Q96RU7 358 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 TCF12Q99081 682 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 BEGAINQ9BUH8 593 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 ADGRE3Q9BY15 652 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 MUC3BQ9H195 1237 aa8.21□□□□□ -1.1
UBR4-202ENST00000375224 AGO1Q9UL18 857 aaKnown RBP8.21□□□□□ -1.1
UBR4-202ENST00000375224 TTC24A2A3L6 582 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 MUSKO15146 869 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 GOT2P00505 430 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 MBL2P11226 248 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 PPM1AP35813 382 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CPA2P48052 419 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 DLG1Q12959 904 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 ZNF460Q14592 562 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 IHHQ14623 411 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 TRMT5Q32P41 509 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 TMEM214Q6NUQ4 689 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 DNAJB7Q7Z6W7 309 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 PATL1Q86TB9 770 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 CCNYL1Q8N7R7 359 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 USP13Q92995 863 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 RMDN1Q96DB5 314 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 UBXN10Q96LJ8 280 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 PRICKLE1Q96MT3 831 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 TRMOQ9BU70 441 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 NLE1Q9NVX2 485 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 CDYLQ9Y232 598 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 MAP3K7O43318 606 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CBFA2T3O75081 653 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 OXSR1O95747 527 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 KLKB1P03952 638 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 IRF1P10914 325 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CR2P20023 1033 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 MPSTP25325 297 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 NUMBP49757 651 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 ARSDP51689 593 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 GALNT1Q10472 559 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 TWF1Q12792 350 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 GALNT3Q14435 633 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 RNF219Q5W0B1 726 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 AFTPHQ6ULP2 937 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 ATG14Q6ZNE5 492 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 HJURPQ8NCD3 748 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 DDHD1Q8NEL9 900 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 DNAJC1Q96KC8 554 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 FAM161BQ96MY7 647 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 OLFM1Q99784 485 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CRISPLD2Q9H0B8 497 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 TPK1Q9H3S4 243 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 POMKQ9H5K3 350 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 MRPL17Q9NRX2 175 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 GKN1Q9NS71 199 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 HACD3Q9P035 362 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 TIMM22Q9Y584 194 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CCDC162PA2VCL2 907 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CBX4O00257 560 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 IPO13O94829 963 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 S100BP04271 92 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 CHRNGP07510 517 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 TPBGLP0DKB5 382 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 THRAP10827 490 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 GLDCP23378 1020 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 PSMA3P25788 255 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CYTH1Q15438 398 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 SLC9B1Q4ZJI4 515 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 INO80DQ53TQ3 878 aaPredicted RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 PAF1Q8N7H5 531 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CDKN2AIPNLQ96HQ2 116 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 CEP44Q9C0F1 390 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 SYTL2Q9HCH5 934 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 NDUFA13Q9P0J0 144 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 LSM7Q9UK45 103 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 ARHGAP26Q9UNA1 814 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms